Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 MIR422A-201ENST00000362286 90 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 Y_RNA.54-201ENST00000362766 105 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 SNORD27-201ENST00000363981 72 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 RNU6-514P-201ENST00000384208 107 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 Y_RNA.569-201ENST00000384749 103 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHDQ96IW2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.51□□□□□ -1.85
SHDQ96IW2 AC005042.3-201ENST00000453230 174 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 MTND1P19-201ENST00000511780 315 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 RNU6-107P-201ENST00000516643 102 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.51□□□□□ -1.85
SHDQ96IW2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.51□□□□□ -1.85
SHDQ96IW2 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.51□□□□□ -1.85
SHDQ96IW2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.51□□□□□ -1.85
SHDQ96IW2 BX284668.6-201ENST00000606899 438 ntBASIC3.51□□□□□ -1.85
SHDQ96IW2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHDQ96IW2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHDQ96IW2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHDQ96IW2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHDQ96IW2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHDQ96IW2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHDQ96IW2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SHDQ96IW2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHDQ96IW2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
SHDQ96IW2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SHDQ96IW2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHDQ96IW2 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 U6atac.2-201ENST00000408644 118 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.5□□□□□ -1.85
SHDQ96IW2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.5□□□□□ -1.85
SHDQ96IW2 RPS12P18-201ENST00000442381 270 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.5□□□□□ -1.85
SHDQ96IW2 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.5□□□□□ -1.85
SHDQ96IW2 SCARNA3-201ENST00000517097 143 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.5□□□□□ -1.85
SHDQ96IW2 AC068205.3-201ENST00000636385 468 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 MIR3674-201ENST00000636576 68 ntBASIC3.5□□□□□ -1.85
SHDQ96IW2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHDQ96IW2 SNORA25.1-201ENST00000362326 128 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 RNU6-1266P-201ENST00000362794 105 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 RNU6-1264P-201ENST00000383891 107 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 SNORA12-201ENST00000391162 147 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 AL603910.2-201ENST00000407268 136 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 Z98941.1-201ENST00000407764 100 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 ELOCP21-201ENST00000412558 336 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 POLR2KP2-201ENST00000438155 177 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 Z98949.2-201ENST00000440996 144 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 AC109925.1-201ENST00000478069 331 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 AC008749.1-201ENST00000597650 306 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 AC022441.3-201ENST00000605737 136 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.49□□□□□ -1.85
SHDQ96IW2 U2.14-201ENST00000615943 113 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.49□□□□□ -1.85
SHDQ96IW2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.49□□□□□ -1.85
SHDQ96IW2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHDQ96IW2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SHDQ96IW2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 SNORA80A-201ENST00000363922 136 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 Y_RNA.286-201ENST00000364813 102 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 Y_RNA.415-201ENST00000384012 112 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 MIR1294-201ENST00000408503 142 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 AC126124.2-201ENST00000413542 321 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 Z75741.1-201ENST00000446793 314 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 HMGB3P17-201ENST00000504195 649 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.48□□□□□ -1.85
SHDQ96IW2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.48□□□□□ -1.85
SHDQ96IW2 RNU5F-4P-201ENST00000516581 114 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 RNU1-117P-201ENST00000517041 158 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 RNU6-586P-201ENST00000517265 104 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 MIR3199-1-201ENST00000582434 88 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 MIR3124-201ENST00000582636 67 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 AC006380.1-201ENST00000603598 186 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 AC069294.1-201ENST00000608397 350 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 MIR7106-201ENST00000612419 65 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 AL590240.4-201ENST00000616908 390 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
SHDQ96IW2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SHDQ96IW2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHDQ96IW2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHDQ96IW2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.48□□□□□ -1.85
SHDQ96IW2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.48□□□□□ -1.85
SHDQ96IW2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHDQ96IW2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SHDQ96IW2 RNU1-75P-201ENST00000347264 129 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 RNA5SP197-201ENST00000363357 119 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 SNORD32B-201ENST00000364460 84 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 SNORA68.1-201ENST00000364537 132 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 AL357075.1-201ENST00000404107 726 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 RPL30P4-201ENST00000429309 333 ntBASIC3.47□□□□□ -1.85
SHDQ96IW2 RNU6-111P-201ENST00000517179 105 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms