Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RPL21P1-201ENST00000399532 476 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 SNORA11.2-201ENST00000408318 127 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 AC083906.5-201ENST00000503722 328 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 SNORA25.14-201ENST00000516481 132 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RNU6-1012P-201ENST00000516606 109 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 SCARNA13-201ENST00000516672 275 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RN7SKP49-201ENST00000516675 260 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 AC022080.3-201ENST00000544433 482 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 EIF4BP1-201ENST00000554881 351 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 UBL5P4-201ENST00000562584 236 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RAC1P9-201ENST00000604990 392 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 AC130454.1-201ENST00000622948 401 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 snoU2_19.1-201ENST00000362361 80 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.19-201ENST00000362462 99 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.401-201ENST00000383965 117 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 RNU6-245P-201ENST00000384020 107 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 RNU6-574P-201ENST00000384265 107 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 RNA5SP201-201ENST00000410316 124 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 SNORD12B-201ENST00000410433 91 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AL139132.1-201ENST00000431587 344 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC112220.1-201ENST00000434628 355 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC073901.1-201ENST00000462471 408 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC145146.1-201ENST00000496370 254 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC067942.3-201ENST00000512025 362 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 CYCSP23-201ENST00000519781 313 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 MIR4659A-201ENST00000580269 81 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC010999.1-201ENST00000611856 324 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 AC240442.1-201ENST00000616055 283 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 U6.104-201ENST00000637979 90 ntBASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.7□□□□□ -1.98
CTHRC1Q96CG8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 RNU6-873P-201ENST00000363833 107 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 RNU6-702P-201ENST00000364982 107 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 RNU6-318P-201ENST00000384283 103 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 MIR29B2-201ENST00000385055 81 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 ELOCP20-201ENST00000422460 345 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC244505.4-201ENST00000434905 287 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC107083.1-201ENST00000439643 279 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 SSXP5-201ENST00000443473 287 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 RPS29P26-201ENST00000477483 171 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC026470.2-201ENST00000561492 181 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 AC125232.2-201ENST00000592457 143 ntBASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTHRC1Q96CG8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC092435.3-201ENST00000565538 3654 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC093908.1-201ENST00000623125 8092 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SNORD21-201ENST00000383953 95 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 RNU6-926P-201ENST00000384075 107 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MIR329-1-201ENST00000385028 80 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MRPL35P1-201ENST00000404272 572 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MIR1302-6-201ENST00000408466 90 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AL139281.1-201ENST00000422120 335 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AL445305.1-201ENST00000432577 575 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MICF-203ENST00000432679 129 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC140059.1-201ENST00000489238 361 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 SCARNA3-201ENST00000517097 143 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 HSPE1P18-201ENST00000517602 280 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 MIR8062-201ENST00000621515 85 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 AC090517.3-201ENST00000625170 141 ntBASIC2.68□□□□□ -1.98
CTHRC1Q96CG8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms