Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
HMGB4Q8WW32 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGB4Q8WW32 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RNA5SP289-201ENST00000362332 137 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RNA5SP432-201ENST00000362480 116 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.112-201ENST00000363250 102 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.252-201ENST00000364556 101 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RPL21P75-201ENST00000396599 483 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RPL21P28-201ENST00000401418 483 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC018865.2-201ENST00000423631 129 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 MTCO2P12-201ENST00000427426 682 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC092423.1-201ENST00000430165 186 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC099799.1-201ENST00000439809 192 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC007677.1-201ENST00000445757 515 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RPL21P39-201ENST00000463605 483 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC087190.1-201ENST00000484462 480 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC093591.1-201ENST00000491435 481 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RPL21P16-201ENST00000495531 483 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC105758.1-201ENST00000506038 399 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 CBX3P7-201ENST00000532876 502 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC018630.3-201ENST00000542637 96 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 AC078899.3-201ENST00000599065 212 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 MIR1244-1-201ENST00000612829 85 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 MIR1244-3-201ENST00000635744 85 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 MIR1244-2-201ENST00000636449 85 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 MIR1244-4-202ENST00000636813 85 ntBASIC2.61□□□□□ -1.99
HMGB4Q8WW32 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RNU6-137P-201ENST00000363680 108 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.319-201ENST00000365138 92 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RNU6-474P-201ENST00000384243 107 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.496-201ENST00000384444 101 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 CBX3P6-201ENST00000430257 527 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RNU6-1153P-201ENST00000516760 105 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RNU6-58P-201ENST00000517143 103 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 HSPE1P18-201ENST00000517602 280 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC109329.2-201ENST00000519658 482 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 SNRPGP18-201ENST00000553000 214 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC016727.2-201ENST00000603988 621 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC087588.2-201ENST00000617667 426 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 AC134503.1-201ENST00000633048 54 ntBASIC2.6□□□□□ -1.99
HMGB4Q8WW32 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
HMGB4Q8WW32 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.106-201ENST00000363189 100 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.364-201ENST00000365532 101 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 Y_RNA.428-201ENST00000384078 102 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 MIR625-201ENST00000385047 85 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 SNORA3.2-201ENST00000408221 125 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 RNU6-1198P-201ENST00000516904 67 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 RNA5SP54-201ENST00000516951 92 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 SNORD116.3-201ENST00000517176 78 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGB4Q8WW32 AC107871.2-201ENST00000612894 502 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 AC135776.4-201ENST00000624300 1904 ntBASIC2.59□□□□□ -1.99
HMGB4Q8WW32 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.59□□□□□ -2
HMGB4Q8WW32 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.58□□□□□ -2
HMGB4Q8WW32 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGB4Q8WW32 Y_RNA.128-201ENST00000363391 112 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 Y_RNA.445-201ENST00000384168 102 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 Z82209.1-201ENST00000422141 2135 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
HMGB4Q8WW32 MTCYBP6-201ENST00000441810 138 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 Y_RNA.631-201ENST00000459607 101 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 AP000870.1-201ENST00000472927 406 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 AC103975.1-201ENST00000482506 483 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.58□□□□□ -2
HMGB4Q8WW32 RNU7-4P-201ENST00000516961 62 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.58□□□□□ -2
HMGB4Q8WW32 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.58□□□□□ -2
HMGB4Q8WW32 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 SNRPGP17-201ENST00000603780 214 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.58□□□□□ -2
HMGB4Q8WW32 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 BX322639.1-202ENST00000423987 2213 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms