Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 Y_RNA.10-201ENST00000362371 110 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 Y_RNA.73-201ENST00000362910 113 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 SNORD31B-201ENST00000364977 69 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 RPS16P5-201ENST00000406501 404 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 Y_RNA.601-201ENST00000410500 113 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 RNU7-164P-201ENST00000459221 62 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 RNU6-1096P-201ENST00000517089 102 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 ATP5J2P6-201ENST00000565203 266 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AC022217.4-201ENST00000604389 163 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AL110115.1-201ENST00000614396 364 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 SNX18P1Y-201ENST00000616231 511 ntBASIC4.7□□□□□ -1.66
PTCD2Q8WV60 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD2Q8WV60 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-1125P-201ENST00000363601 107 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-234P-201ENST00000365229 104 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 SNORA4.2-201ENST00000365313 147 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 SNORA2.2-201ENST00000365473 135 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-1235P-201ENST00000384559 107 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-750P-201ENST00000390946 107 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNA5SP332-201ENST00000391063 115 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-279P-201ENST00000391297 101 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RPL21P65-201ENST00000406094 466 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 AC073261.1-201ENST00000429409 121 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 SNRPGP10-201ENST00000432323 225 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RNU6-498P-201ENST00000459468 107 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 AP002884.2-201ENST00000471647 395 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 HMGN1P7-201ENST00000491722 313 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 AL110118.1-201ENST00000553543 400 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 RN7SL690P-201ENST00000582087 240 ntBASIC4.69□□□□□ -1.66
PTCD2Q8WV60 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PTCD2Q8WV60 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 AC016831.4-201ENST00000438302 307 ntBASIC4.68□□□□□ -1.66
PTCD2Q8WV60 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 RNU7-61P-201ENST00000515897 61 ntBASIC4.68□□□□□ -1.66
PTCD2Q8WV60 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
PTCD2Q8WV60 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 MIR548A2-201ENST00000384956 97 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 MIR520G-201ENST00000385064 90 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC016909.1-201ENST00000415916 166 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC009220.1-201ENST00000451614 275 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC023141.12-201ENST00000512399 199 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC004486.1-201ENST00000546846 233 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 MIR3690-201ENST00000580266 75 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.67□□□□□ -1.66
PTCD2Q8WV60 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCD2Q8WV60 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 RNU6-944P-201ENST00000364023 107 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 SNORD96B-201ENST00000386148 79 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 MIR298-201ENST00000401212 88 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AL353689.1-201ENST00000438895 199 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 SCARNA10-201ENST00000459255 330 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AL133162.1-201ENST00000463228 453 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AC006463.2-201ENST00000473326 348 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 PARP4P3-201ENST00000510265 317 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCD2Q8WV60 RNA5SP446-201ENST00000515955 82 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 RNU6-1231P-201ENST00000517185 103 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 IGKV1-32-201ENST00000519290 311 ntBASIC4.66□□□□□ -1.66
PTCD2Q8WV60 AC008507.4-201ENST00000585464 127 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms