Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 RPL19P1-201ENST00000411635 428 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.46□□□□□ -2.02
SNED1Q8TER0 Z82210.1-201ENST00000440037 231 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC003989.2-201ENST00000440224 169 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.46□□□□□ -2.02
SNED1Q8TER0 RPL17P19-201ENST00000489069 552 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC114801.2-201ENST00000503825 781 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 RNU6-475P-201ENST00000516073 104 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC022616.4-201ENST00000522985 181 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.46□□□□□ -2.02
SNED1Q8TER0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.46□□□□□ -2.02
SNED1Q8TER0 TRAV28-201ENST00000557548 323 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC109446.1-201ENST00000566172 220 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 MIR548AC-201ENST00000585049 88 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC062037.2-201ENST00000610137 73 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 AC034102.8-201ENST00000615146 484 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
SNED1Q8TER0 UBE2L2-201ENST00000254302 429 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 RNU6-457P-201ENST00000363999 107 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 RNU6-1179P-201ENST00000384667 107 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 RNU6-1156P-201ENST00000410365 100 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 AL030996.1-201ENST00000411430 235 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 OSTCP8-201ENST00000445117 448 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 AL360271.2-201ENST00000447710 161 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 PCNPP5-201ENST00000452246 481 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 AC105758.1-201ENST00000506038 399 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 AC016727.2-201ENST00000603988 621 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 AL355297.3-201ENST00000604082 446 ntBASIC2.45□□□□□ -2.02
SNED1Q8TER0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
SNED1Q8TER0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
SNED1Q8TER0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNED1Q8TER0 RNU1-109P-201ENST00000383960 147 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 Y_RNA.534-201ENST00000384599 112 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 Y_RNA.577-201ENST00000384794 101 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 RNU6-607P-201ENST00000411283 108 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 AC098614.2-201ENST00000426040 255 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 RPS15AP10-201ENST00000432472 382 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 SNORD13-201ENST00000459299 104 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 ACA59.1-201ENST00000515966 143 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 RNU6-388P-201ENST00000517012 105 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 RNU6-389P-201ENST00000517048 105 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 RN7SKP40-201ENST00000517211 242 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 AP005902.1-201ENST00000521358 186 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 AC131281.1-201ENST00000522984 164 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.44□□□□□ -2.02
SNED1Q8TER0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.44□□□□□ -2.02
SNED1Q8TER0 AC005357.1-201ENST00000588399 301 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 AL021879.1-201ENST00000611756 288 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 Z99571.1-201ENST00000636677 394 ntBASIC2.44□□□□□ -2.02
SNED1Q8TER0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
SNED1Q8TER0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNED1Q8TER0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-512P-201ENST00000364438 103 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-596P-201ENST00000365395 98 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-217P-201ENST00000384164 104 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 MIR1252-201ENST00000408861 65 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU2-3P-201ENST00000410144 191 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-174P-201ENST00000410406 106 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 CYCSP33-201ENST00000414485 327 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL353621.1-201ENST00000418219 243 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL353997.1-201ENST00000432936 108 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC112492.4-201ENST00000456549 352 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC104564.1-201ENST00000493028 407 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC022447.4-201ENST00000504053 364 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-927P-201ENST00000516199 100 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNY3P15-201ENST00000516297 97 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 SNORA31.18-201ENST00000517043 134 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 MIR1273C-201ENST00000578669 77 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 AL355877.2-201ENST00000603670 358 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 Z98751.3-201ENST00000604447 521 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.43□□□□□ -2.02
SNED1Q8TER0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNED1Q8TER0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SNED1Q8TER0 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.489-201ENST00000384410 101 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU6-933P-201ENST00000384424 107 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MIR301A-201ENST00000385261 86 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AL513331.1-201ENST00000411908 397 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 323.6 ms