Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-383P-201ENST00000410864 94 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RNU6-1245P-201ENST00000411130 106 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 AC007919.1-201ENST00000429380 217 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 HSPE1P21-201ENST00000438283 308 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RBMY2UP-201ENST00000453474 324 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 SNRPGP8-201ENST00000454064 226 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RPL23AP14-201ENST00000468281 468 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 AC016632.1-201ENST00000503994 196 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 RN7SKP12-201ENST00000516275 143 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 MIR378D2-201ENST00000580636 98 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 U3.45-201ENST00000607547 219 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 AL049781.1-201ENST00000623195 3585 ntBASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD1Q8NHV4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 AC022336.2-201ENST00000568966 2538 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 SNORD56.1-201ENST00000362913 68 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 RNU6-1107P-201ENST00000364817 104 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MIR7-3-201ENST00000384898 110 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MIR183-201ENST00000384958 110 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MIR1278-201ENST00000408753 81 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 RNU2-68P-201ENST00000410878 191 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 DBIP2-201ENST00000419076 262 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 AL356867.1-201ENST00000429623 299 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 AC245047.4-201ENST00000433189 144 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 RN7SL293P-201ENST00000481765 281 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MIR4724-201ENST00000579485 89 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 AC025166.1-201ENST00000612411 163 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 AC090132.2-201ENST00000615881 347 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 U6.99-201ENST00000637524 83 ntBASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NEDD1Q8NHV4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNU6-978P-201ENST00000364371 103 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNU6-1141P-201ENST00000364520 107 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNA5SP167-201ENST00000365461 116 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNU6-756P-201ENST00000383997 107 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNU6-1152P-201ENST00000384576 107 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 MIR544A-201ENST00000384855 91 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 MIR153-1-201ENST00000384914 90 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 Y_RNA.622-201ENST00000411091 108 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 CYP4F29P-201ENST00000420685 446 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 KC877373.1-201ENST00000479066 408 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 RNU6-579P-201ENST00000516879 102 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 AC093331.1-201ENST00000521474 169 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 AC020895.1-201ENST00000595362 272 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 AC069200.1-201ENST00000609511 323 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 AC019176.2-201ENST00000611579 315 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 MTND5P18-201ENST00000445624 1801 ntBASIC4.21□□□□□ -1.74
NEDD1Q8NHV4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 SNORA63.1-201ENST00000362493 131 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-309P-201ENST00000364573 106 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 Y_RNA.341-201ENST00000365341 102 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 Y_RNA.346-201ENST00000365385 112 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-1264P-201ENST00000383891 107 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 Y_RNA.415-201ENST00000384012 112 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 SNORA70E-201ENST00000384492 135 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNY1P7-201ENST00000384743 110 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 MIR29B2-201ENST00000385055 81 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 SNORD78.1-201ENST00000390866 65 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-837P-201ENST00000391056 108 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-855P-201ENST00000410395 104 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 AC012306.1-201ENST00000423267 114 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 AC109327.2-201ENST00000448339 378 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 AC023141.12-201ENST00000512399 199 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-703P-201ENST00000516946 107 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 PRELID2P1-201ENST00000552837 301 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 U6.105-201ENST00000637379 88 ntBASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD1Q8NHV4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD1Q8NHV4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.19□□□□□ -1.74
NEDD1Q8NHV4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD1Q8NHV4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NEDD1Q8NHV4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.19□□□□□ -1.74
NEDD1Q8NHV4 RNU6-647P-201ENST00000364243 107 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms