Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SNORA43.2-201ENST00000516652 128 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 CR383656.8-201ENST00000549046 145 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 MIR4325-201ENST00000583049 90 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 AC024153.1-201ENST00000603103 365 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 AL137843.1-201ENST00000605078 385 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 YPEL5P2-201ENST00000605553 359 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 RPL23AP88-201ENST00000605759 454 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 AC097372.5-201ENST00000623665 376 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 AC127459.3-201ENST00000624328 466 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 SCARNA4-201ENST00000629045 128 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 MIR7515-201ENST00000637837 67 ntBASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
SIMC1Q8NDZ2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 Y_RNA.76-201ENST00000362931 109 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-290P-201ENST00000365212 101 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-487P-201ENST00000365430 104 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-926P-201ENST00000384075 107 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 SNORD63-201ENST00000384262 68 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 Y_RNA.464-201ENST00000384282 110 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-318P-201ENST00000384283 103 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 FTH1P15-201ENST00000406984 280 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 AL445305.1-201ENST00000432577 575 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 AC016700.2-201ENST00000446011 156 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 AL031659.1-201ENST00000447075 539 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 AL353705.4-201ENST00000449661 238 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 CBX3P4-201ENST00000538909 354 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 MIR4765-201ENST00000585007 77 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
SIMC1Q8NDZ2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-545P-201ENST00000362681 104 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 MIR32-201ENST00000384965 70 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AL357075.1-201ENST00000404107 726 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 EIF1P2-201ENST00000428233 350 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AC243964.1-201ENST00000441814 261 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 RPL23AP49-201ENST00000492925 468 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 RMST_6.1-201ENST00000611980 203 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 AL109809.4-201ENST00000603520 2185 ntBASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIMC1Q8NDZ2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 MIR411-201ENST00000362239 96 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU4-90P-201ENST00000362773 141 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-942P-201ENST00000363002 107 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 SNORD115-32-201ENST00000364079 82 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-879P-201ENST00000364328 108 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-662P-201ENST00000384253 104 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-843P-201ENST00000384454 104 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 MIR627-201ENST00000384979 97 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNA5SP213-201ENST00000391031 106 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 MICF-203ENST00000432679 129 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU7-120P-201ENST00000459334 63 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 AP000870.1-201ENST00000472927 406 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 AC091874.1-201ENST00000511402 339 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 AC107393.1-201ENST00000512403 346 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RNU6-255P-201ENST00000516957 105 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 LARP7P3-201ENST00000579888 337 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 MIR2682-201ENST00000580305 110 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 MIR3910-1-201ENST00000580936 111 ntBASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIMC1Q8NDZ2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIMC1Q8NDZ2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms