Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 SNORA5B-201ENST00000363786 132 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RNU6-743P-201ENST00000364151 106 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RNA5SP240-201ENST00000365355 128 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RNU6-26P-201ENST00000383985 107 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RNU6-793P-201ENST00000384233 104 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.551-201ENST00000384661 102 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 AC091826.1-201ENST00000514065 313 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RNY3P15-201ENST00000516297 97 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.683-201ENST00000516508 93 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 AC023824.2-201ENST00000566185 400 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 RPL12P50-201ENST00000603116 116 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 MZT1P2-201ENST00000604387 248 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 MTND5P35-201ENST00000557537 1720 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 SNORA63.7-201ENST00000365579 123 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 RNU6-245P-201ENST00000384020 107 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AL139281.1-201ENST00000422120 335 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 SDAD1P3-201ENST00000427380 333 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 RPS23P5-201ENST00000495419 428 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AC008885.1-201ENST00000514930 301 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 MTCO2P24-201ENST00000515611 426 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 RNU6-107P-201ENST00000516643 102 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 RN7SKP49-201ENST00000516675 260 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AC034114.1-201ENST00000520293 285 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 MIR3616-201ENST00000584070 92 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AL355297.3-201ENST00000604082 446 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNPOQ8N3V7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 MIR329-1-201ENST00000385028 80 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 RNA5SP213-201ENST00000391031 106 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 RNU2-32P-201ENST00000411193 191 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 UQCRBP2-201ENST00000447827 297 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 FCF1P4-201ENST00000448326 183 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC091179.3-201ENST00000474761 144 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 DEFB131C-201ENST00000528817 165 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 RRN3P3-201ENST00000549207 578 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC006023.1-201ENST00000603944 259 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 RAC1P9-201ENST00000604990 392 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.772-201ENST00000606692 102 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC240442.1-201ENST00000616055 283 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC092628.2-201ENST00000622492 339 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
SYNPOQ8N3V7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 SNORD32B-201ENST00000364460 84 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNA5SP125-201ENST00000364843 120 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNU6-546P-201ENST00000383991 107 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.439-201ENST00000384119 94 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.452-201ENST00000384202 108 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.458-201ENST00000384240 102 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNU6-1026P-201ENST00000384465 108 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RPEP5-201ENST00000441137 268 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNU7-14P-201ENST00000459331 62 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 AC010655.3-201ENST00000478818 450 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 RNU6-56P-201ENST00000516986 93 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 MIR3149-201ENST00000584629 83 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 AC006006.1-201ENST00000603082 144 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 AL033523.1-201ENST00000605153 153 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 AL021879.1-201ENST00000611756 288 ntBASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNPOQ8N3V7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.176-201ENST00000363815 109 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms