Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SNORA38-201ENST00000363946 132 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 SNORD46.1-201ENST00000364139 104 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RNU6-806P-201ENST00000365147 105 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 SNORD14.1-201ENST00000365609 90 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 MIR153-2-201ENST00000385225 87 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 SNORA46.1-201ENST00000391069 153 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 MTCYBP2-201ENST00000407745 171 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 MIR1302-6-201ENST00000408466 90 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 SNORA11-201ENST00000408789 128 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 AC099799.1-201ENST00000439809 192 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RPS29P2-201ENST00000479278 136 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 AC023824.2-201ENST00000566185 400 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RMST_6.1-201ENST00000611980 203 ntBASIC2.89□□□□□ -1.95
KRT78Q8N1N4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRT78Q8N1N4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC073325.2-201ENST00000339545 159 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RNY3P11-201ENST00000364153 102 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.405-201ENST00000383979 100 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.451-201ENST00000384200 100 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.524-201ENST00000384564 100 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.561-201ENST00000384694 100 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 MIR548M-201ENST00000408260 86 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 MIR320B2-201ENST00000408479 138 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 ELOCP20-201ENST00000422460 345 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC092423.1-201ENST00000430165 186 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 MTND5P15-201ENST00000434246 349 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 Z82188.1-201ENST00000436709 154 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RNU7-26P-201ENST00000458980 63 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RPL30P10-201ENST00000488148 337 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC007179.3-201ENST00000604976 235 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AC108206.1-201ENST00000570186 4159 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
KRT78Q8N1N4 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
KRT78Q8N1N4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.64-201ENST00000362845 102 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 SNORD115-32-201ENST00000364079 82 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 SNORA20.1-201ENST00000364790 130 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 UBA52P6-201ENST00000399822 382 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AL139281.1-201ENST00000422120 335 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 MTCO3P29-201ENST00000432119 779 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 TOMM22P6-201ENST00000465035 409 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 RNU6-406P-201ENST00000516470 107 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC040926.1-201ENST00000530195 238 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 SUB1P3-201ENST00000564581 315 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC004584.2-201ENST00000570407 410 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 MIR5188-201ENST00000583467 113 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC096577.2-201ENST00000611455 153 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT78Q8N1N4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 MIR4272-201ENST00000635924 64 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC009487.2-201ENST00000420969 6821 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC093831.2-201ENST00000624393 3427 ntBASIC2.87□□□□□ -1.95
KRT78Q8N1N4 AC000403.1-201ENST00000613696 3585 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT78Q8N1N4 RNA5SP374-201ENST00000362939 125 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 RNU6-378P-201ENST00000384324 107 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 Y_RNA.515-201ENST00000384535 112 ntBASIC2.86□□□□□ -1.95
KRT78Q8N1N4 SNORA12.2-201ENST00000391040 156 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms