Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR586-201ENST00000385035 97 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 MIR548B-201ENST00000385247 97 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 RNA5SP354-201ENST00000391247 136 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 RPL29P14-201ENST00000495837 428 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 RNU6-426P-201ENST00000516464 97 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 RNU6-1007P-201ENST00000516586 107 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX5Q8N196 AC025627.2-201ENST00000576220 160 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX5Q8N196 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX5Q8N196 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIX5Q8N196 AC007256.1-201ENST00000392253 2765 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIX5Q8N196 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SIX5Q8N196 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX5Q8N196 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 Y_RNA.24-201ENST00000362508 103 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 RNU6-1077P-201ENST00000410506 102 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 AC074290.1-201ENST00000448883 135 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 ABCF2P2-201ENST00000450549 296 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX5Q8N196 RNU6-479P-201ENST00000516348 105 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.11□□□□□ -1.75
SIX5Q8N196 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.11□□□□□ -1.75
SIX5Q8N196 AL136164.4-201ENST00000625013 2135 ntBASIC4.11□□□□□ -1.75
SIX5Q8N196 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX5Q8N196 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX5Q8N196 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX5Q8N196 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SIX5Q8N196 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX5Q8N196 RNVU1-14-201ENST00000384770 164 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 MIR218-2-201ENST00000385006 110 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 RNU6-1154P-201ENST00000391001 104 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 SNORA3.3-201ENST00000408712 125 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 RN7SL293P-201ENST00000481765 281 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 RNA5SP179-201ENST00000517284 121 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX5Q8N196 MIR548X2-201ENST00000579776 100 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 MIR4765-201ENST00000585007 77 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 RPL30P11-203ENST00000598995 310 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 AC025754.2-201ENST00000606491 432 ntBASIC4.1□□□□□ -1.75
SIX5Q8N196 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX5Q8N196 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX5Q8N196 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
SIX5Q8N196 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SIX5Q8N196 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX5Q8N196 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX5Q8N196 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX5Q8N196 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX5Q8N196 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX5Q8N196 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX5Q8N196 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SIX5Q8N196 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 snoU2_19.4-201ENST00000364329 80 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 RNA5SP97-201ENST00000365006 84 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 RNU6-376P-201ENST00000384731 106 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 AL138878.1-201ENST00000405131 347 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 AL035423.1-201ENST00000420331 213 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 EIF4EP4-201ENST00000424916 578 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 HSPE1P21-201ENST00000438283 308 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 RNU7-141P-201ENST00000459304 62 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX5Q8N196 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX5Q8N196 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX5Q8N196 AC103810.1-201ENST00000579873 453 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 AC090616.3-201ENST00000582184 217 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX5Q8N196 AC091167.4-201ENST00000605079 184 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX5Q8N196 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
SIX5Q8N196 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX5Q8N196 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SIX5Q8N196 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
SIX5Q8N196 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SIX5Q8N196 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX5Q8N196 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.76
SIX5Q8N196 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
SIX5Q8N196 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.76
SIX5Q8N196 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.09□□□□□ -1.76
SIX5Q8N196 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX5Q8N196 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.09□□□□□ -1.76
SIX5Q8N196 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SIX5Q8N196 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX5Q8N196 MIR367-201ENST00000362299 68 ntBASIC4.08□□□□□ -1.76
SIX5Q8N196 Y_RNA.310-201ENST00000365063 113 ntBASIC4.08□□□□□ -1.76
SIX5Q8N196 SNORD6-201ENST00000365444 73 ntBASIC4.08□□□□□ -1.76
SIX5Q8N196 RNU6-969P-201ENST00000383900 105 ntBASIC4.08□□□□□ -1.76
SIX5Q8N196 MIR526A2-201ENST00000390198 65 ntBASIC4.08□□□□□ -1.76
SIX5Q8N196 Y_RNA.586-201ENST00000391146 98 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms