Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 AC240442.1-201ENST00000616055 283 ntBASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 AC130454.1-201ENST00000622948 401 ntBASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 MIR7515-201ENST00000637837 67 ntBASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTCHD4Q6ZW05 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.105-201ENST00000363182 111 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-280P-201ENST00000364145 104 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-702P-201ENST00000364982 107 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.439-201ENST00000384119 94 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 MIR329-1-201ENST00000385028 80 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 SNORD12B-201ENST00000410433 91 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AC112220.1-201ENST00000434628 355 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 snoU13.22-201ENST00000459428 104 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 RN7SKP49-201ENST00000516675 260 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 RPL30P11-203ENST00000598995 310 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AC010205.1-201ENST00000616668 449 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 MIR8062-201ENST00000621515 85 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 MIR622-201ENST00000638396 96 ntBASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.7□□□□□ -1.98
PTCHD4Q6ZW05 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC000403.1-201ENST00000613696 3585 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RNU1-35P-201ENST00000362782 153 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-486P-201ENST00000363116 107 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.396-201ENST00000383949 103 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AL079342.1-201ENST00000401460 267 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-121P-201ENST00000410525 99 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 LINC01399-202ENST00000458450 244 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC073901.1-201ENST00000462471 408 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC140059.1-201ENST00000489238 361 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-1143P-201ENST00000516125 104 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 SNORA25.14-201ENST00000516481 132 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AL670379.2-201ENST00000604983 252 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.772-201ENST00000606692 102 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 BX322639.1-202ENST00000423987 2213 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PTCHD4Q6ZW05 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 SNORA71.3-201ENST00000362582 128 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.143-201ENST00000363520 106 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 U3.9-201ENST00000363823 204 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 RNA5SP267-201ENST00000364893 126 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 RNU6-1145P-201ENST00000384246 107 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 SNORA46.1-201ENST00000391069 153 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AL590004.2-201ENST00000404787 371 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AC006028.1-201ENST00000438379 402 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AC010095.1-201ENST00000443543 144 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 PCNPP5-201ENST00000452246 481 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.713-201ENST00000517013 96 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 EIF4A1P12-201ENST00000551910 141 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 AC010999.1-201ENST00000611856 324 ntBASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PTCHD4Q6ZW05 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 MIR22-201ENST00000362190 85 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.401-201ENST00000383965 117 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.461-201ENST00000384263 103 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 Y_RNA.556-201ENST00000384677 113 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 SNORA12-201ENST00000391162 147 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 MRPL35P1-201ENST00000404272 572 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 RNU2-20P-201ENST00000410425 191 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 RNA5SP120-201ENST00000410900 112 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 RPL21P38-201ENST00000418090 167 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AP003733.2-201ENST00000529409 171 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC027176.1-201ENST00000560204 514 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 AC136932.1-201ENST00000574771 208 ntBASIC2.67□□□□□ -1.98
PTCHD4Q6ZW05 MIR5194-201ENST00000582634 120 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms