Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC021231.3-201ENST00000558497 370 ntBASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 MIR4319-201ENST00000577285 85 ntBASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 MIR3616-201ENST00000584070 92 ntBASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 MIR8062-201ENST00000621515 85 ntBASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
C9orf139Q6ZV77 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC093831.2-201ENST00000624393 3427 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-770P-201ENST00000363929 105 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SNORA68.1-201ENST00000364537 132 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SNORA18.3-201ENST00000384122 132 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-611P-201ENST00000384276 104 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-318P-201ENST00000384283 103 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-472P-201ENST00000384299 107 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 MIR147B-201ENST00000390185 80 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU1-139P-201ENST00000391307 165 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-121P-201ENST00000410525 99 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 CYCSP48-201ENST00000417124 323 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AP001324.2-201ENST00000461163 319 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 GZMAP1-201ENST00000503054 631 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC067942.3-201ENST00000512025 362 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RN7SKP132-201ENST00000516001 208 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU5F-2P-201ENST00000516066 82 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNY3P15-201ENST00000516297 97 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SCARNA11.3-201ENST00000517276 130 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC022868.1-201ENST00000517767 391 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC091144.1-201ENST00000519573 138 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC125232.2-201ENST00000592457 143 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AL121655.1-201ENST00000605811 308 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 RNU6-91P-201ENST00000607774 107 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AC007792.1-201ENST00000623023 402 ntBASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf139Q6ZV77 AL365361.1-201ENST00000566942 3481 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 Y_RNA.19-201ENST00000362462 99 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 RNU6-1010P-201ENST00000362757 107 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 Y_RNA.319-201ENST00000365138 92 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 MIR10B-201ENST00000385011 110 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC012306.1-201ENST00000423267 114 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 WARS2P1-201ENST00000429678 537 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AL445305.1-201ENST00000432577 575 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 PCNPP5-201ENST00000452246 481 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AIG1P1-201ENST00000503376 148 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 RNU6-1114P-201ENST00000516022 107 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 Y_RNA.668-201ENST00000516233 93 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 RNU6-1012P-201ENST00000516606 109 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 RNU6-58P-201ENST00000517143 103 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 HSPE1P20-201ENST00000538133 289 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC110588.1-201ENST00000559699 137 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 UBL5P4-201ENST00000562584 236 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC078899.3-201ENST00000599065 212 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC096772.1-201ENST00000609146 564 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AL449363.1-201ENST00000617815 186 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 SNORD98-201ENST00000636377 67 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC010329.5-201ENST00000623497 2174 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 AC008264.2-201ENST00000610193 3731 ntBASIC2.3□□□□□ -2.04
C9orf139Q6ZV77 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 RNU6-212P-201ENST00000362642 104 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 RNA5SP361-201ENST00000362686 118 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 MT-TW-201ENST00000387382 68 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 RNA5SP21-201ENST00000410917 96 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 AC138623.1-201ENST00000418060 216 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 AIMP1P2-201ENST00000425294 312 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 SDAD1P3-201ENST00000427380 333 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 AC096638.1-201ENST00000444678 216 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 AL441985.1-201ENST00000457727 251 ntBASIC2.29□□□□□ -2.04
C9orf139Q6ZV77 LINC01399-202ENST00000458450 244 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms