Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MIR483-201ENST00000385070 76 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 RNU6-159P-201ENST00000391080 106 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 UBA52P6-201ENST00000399822 382 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 MIR548I3-201ENST00000408378 149 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 MIR548I1-201ENST00000408810 149 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 RNA5SP390-201ENST00000410191 113 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC244505.4-201ENST00000434905 287 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 SSXP5-201ENST00000443473 287 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 RPL39P29-201ENST00000447779 157 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 HSPE1P25-201ENST00000455484 251 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC117440.1-201ENST00000474107 571 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC016632.1-201ENST00000503994 196 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC008885.1-201ENST00000514930 301 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 RNU6-496P-201ENST00000516145 99 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 RNU6-58P-201ENST00000517143 103 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 DEFB108E-201ENST00000524692 240 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC022080.3-201ENST00000544433 482 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC000403.1-201ENST00000613696 3585 ntBASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.6□□□□□ -1.99
COLCA1Q6ZS62 AL391987.6-201ENST00000305671 199 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RNU6-879P-201ENST00000364328 108 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RNU6-142P-201ENST00000384019 107 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 MIR329-1-201ENST00000385028 80 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 MIR767-201ENST00000390228 109 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 SNORD58.1-201ENST00000391313 66 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 SNORD12B-201ENST00000410433 91 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RNU6-1001P-201ENST00000411265 100 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AL590135.1-201ENST00000422215 156 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RPS15AP5-201ENST00000436276 388 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AC244670.1-201ENST00000436879 112 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AC004383.1-201ENST00000438135 289 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RPL23AP70-201ENST00000483361 460 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RPS23P5-201ENST00000495419 428 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 RNU6-1338P-201ENST00000516328 91 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AC012493.2-201ENST00000595083 291 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 Y_RNA.772-201ENST00000606692 102 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AL359198.2-201ENST00000611836 194 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 AC091953.5-201ENST00000622919 233 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 MIR3199-2-201ENST00000636243 86 ntBASIC2.59□□□□□ -1.99
COLCA1Q6ZS62 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.59□□□□□ -2
COLCA1Q6ZS62 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -2
COLCA1Q6ZS62 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 Y_RNA.40-201ENST00000362645 93 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 RNA5SP374-201ENST00000362939 125 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 SNORD81.1-201ENST00000363064 77 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 SNORD113-8-201ENST00000363497 74 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 SNORD27-201ENST00000363981 72 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 RNU6-338P-201ENST00000383888 105 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 Y_RNA.478-201ENST00000384358 107 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 AL603910.2-201ENST00000407268 136 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 Y_RNA.602-201ENST00000410535 92 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 RNU2-49P-201ENST00000410666 184 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC096920.1-201ENST00000423991 241 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC005002.2-201ENST00000438228 269 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 HMGB1P35-201ENST00000503360 598 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 RNU5F-8P-201ENST00000515941 111 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 RN7SKP49-201ENST00000516675 260 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 MIR4643-201ENST00000577473 78 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 MIR5695-201ENST00000579717 85 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 MIR4423-201ENST00000580922 80 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 RPL12P50-201ENST00000603116 116 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AL357075.2-201ENST00000614906 189 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 MIR8057-201ENST00000620957 69 ntBASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.58□□□□□ -2
COLCA1Q6ZS62 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.58□□□□□ -2
COLCA1Q6ZS62 AC092268.1-201ENST00000342691 405 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 RNU6-961P-201ENST00000363893 105 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 Y_RNA.286-201ENST00000364813 102 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 RNU6-1145P-201ENST00000384246 107 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 SNORD63-201ENST00000384262 68 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 MIR23A-201ENST00000385245 73 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 MIR549A-201ENST00000385268 96 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.57□□□□□ -2
COLCA1Q6ZS62 AL358075.3-201ENST00000426289 226 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms