Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 RPS27AP9-201ENST00000477681 438 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AC145146.1-201ENST00000496370 254 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 SNORA70.14-201ENST00000516205 110 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AC027176.1-201ENST00000560204 514 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 MIR5006-201ENST00000583027 110 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 SNORD11B-201ENST00000607707 90 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 AC034229.5-201ENST00000624258 185 ntBASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF111Q6ZNA4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNU6-312P-201ENST00000364629 107 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.357-201ENST00000365487 109 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNU6-131P-201ENST00000391144 107 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AL135790.2-201ENST00000437701 267 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RPS20P10-201ENST00000451209 253 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 snoU13.14-201ENST00000459372 104 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNU7-23P-201ENST00000459465 62 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RN7SL542P-201ENST00000467147 294 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNA5SP309-201ENST00000516670 106 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC100767.1-201ENST00000528178 123 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC026333.2-201ENST00000542164 106 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC034105.4-201ENST00000568304 277 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC012493.2-201ENST00000595083 291 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC091895.1-201ENST00000624494 256 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AF127577.6-201ENST00000623352 2191 ntBASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
RNF111Q6ZNA4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AC134026.1-201ENST00000623249 2239 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RNU6-801P-201ENST00000364087 105 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RNU6-1117P-201ENST00000384525 104 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AL031003.1-201ENST00000404229 172 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RNA5SP504-201ENST00000410676 117 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AP002884.2-201ENST00000471647 395 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 RNU6-344P-201ENST00000516635 111 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AC068205.3-201ENST00000636385 468 ntBASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF111Q6ZNA4 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 RNU4-84P-201ENST00000364200 139 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 RNU6-818P-201ENST00000364837 108 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AL359837.1-201ENST00000381357 287 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 Y_RNA.400-201ENST00000383963 111 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 RNU6-750P-201ENST00000390946 107 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 SNORA26.5-201ENST00000391215 123 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AL133547.1-201ENST00000448546 220 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AL049830.2-201ENST00000480072 201 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 SNORD116-25-201ENST00000516517 92 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 HSPE1P18-201ENST00000517602 280 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 CR392039.5-201ENST00000623201 510 ntBASIC3.41□□□□□ -1.86
RNF111Q6ZNA4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RNF111Q6ZNA4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF111Q6ZNA4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF111Q6ZNA4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF111Q6ZNA4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNF111Q6ZNA4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 SNORD115-30-201ENST00000364117 82 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms