Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AP001485.1-201ENST00000604799 199 ntBASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 AF127577.6-201ENST00000623352 2191 ntBASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC068700.1-201ENST00000565862 3754 ntBASIC3.32□□□□□ -1.88
HLA-DQA1Q5Y7H0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC069528.2-201ENST00000624849 1991 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORD50.2-201ENST00000365465 70 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA40.19-201ENST00000390846 128 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA26.5-201ENST00000391215 123 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AL031003.1-201ENST00000404229 172 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AP000567.1-201ENST00000406413 156 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 MIR1254-2-201ENST00000579553 63 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC039056.2-201ENST00000622261 511 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC244205.2-202ENST00000635781 342 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC134026.1-201ENST00000623249 2239 ntBASIC3.31□□□□□ -1.88
HLA-DQA1Q5Y7H0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC000403.1-201ENST00000613696 3585 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 RNU4-17P-201ENST00000365598 141 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA67.2-201ENST00000384300 149 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 RN7SKP27-201ENST00000410684 333 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AL365496.1-201ENST00000426885 215 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC026403.1-201ENST00000518938 295 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC136628.3-201ENST00000521868 290 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 MIR3158-1-201ENST00000583596 81 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
HLA-DQA1Q5Y7H0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 Y_RNA.580-201ENST00000391004 95 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 Z98742.2-201ENST00000431564 187 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 U3.44-201ENST00000458938 192 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC079598.5-201ENST00000547460 117 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 U3.45-201ENST00000607547 219 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC009093.8-201ENST00000641769 292 ntBASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1Q5Y7H0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 RNU4-10P-201ENST00000364383 140 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 Y_RNA.243-201ENST00000364481 109 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 RNU6-312P-201ENST00000364629 107 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 MIR548B-201ENST00000385247 97 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA48.7-201ENST00000391302 135 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 SEPT7P4-201ENST00000437076 306 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 RPS20P10-201ENST00000451209 253 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 RPS27AP9-201ENST00000477681 438 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 SNORA51-201ENST00000606420 132 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 AC010329.5-201ENST00000623497 2174 ntBASIC3.28□□□□□ -1.88
HLA-DQA1Q5Y7H0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-DQA1Q5Y7H0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 Y_RNA.75-201ENST00000362927 97 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 RNU6-81P-201ENST00000365608 104 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 MIR1183-201ENST00000408856 89 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 BMS1P22-201ENST00000414726 313 ntBASIC3.27□□□□□ -1.89
HLA-DQA1Q5Y7H0 CYCSP4-201ENST00000429682 331 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms