Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RC3H1Q5TC82 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 SNORD45.3-201ENST00000363836 72 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 RNU6-1336P-201ENST00000383886 109 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 RNU1-73P-201ENST00000383971 164 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 RNU6-905P-201ENST00000384434 107 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 MIR548A1-201ENST00000385041 97 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 SNORA48.5-201ENST00000391143 135 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 MIR208B-201ENST00000401172 77 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 AC244098.2-201ENST00000422068 99 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 AC103975.1-201ENST00000482506 483 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 AC025554.1-201ENST00000505641 188 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 PPBPP1-201ENST00000510807 373 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 RNU2-27P-201ENST00000516185 142 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 AC006065.5-201ENST00000623427 349 ntBASIC4.67□□□□□ -1.66
RC3H1Q5TC82 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RC3H1Q5TC82 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 SNORA79-201ENST00000408376 140 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 Y_RNA.622-201ENST00000411091 108 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 Y_RNA.649-201ENST00000459077 103 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 RPL21P10-201ENST00000463521 490 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 RNA5SP208-201ENST00000516156 78 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 MIR4298-201ENST00000584380 73 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 LINC01355-201ENST00000566551 5444 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 MFSD8-236ENST00000641509 4050 ntBASIC4.66□□□□□ -1.66
RC3H1Q5TC82 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RC3H1Q5TC82 AC068647.1-201ENST00000489539 2265 ntBASIC4.65□□□□□ -1.66
RC3H1Q5TC82 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RC3H1Q5TC82 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.65□□□□□ -1.66
RC3H1Q5TC82 AL356274.2-201ENST00000624379 3752 ntBASIC4.65□□□□□ -1.66
RC3H1Q5TC82 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.65□□□□□ -1.66
RC3H1Q5TC82 RNU6-106P-201ENST00000384405 107 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 MIR325-201ENST00000385260 98 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 AC069285.2-201ENST00000440210 275 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 RPL37P4-201ENST00000448908 268 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 SNRPGP8-201ENST00000454064 226 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 AC023141.12-201ENST00000512399 199 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 AP003327.1-201ENST00000529684 127 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 AC009163.5-201ENST00000575421 637 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 AL162713.1-201ENST00000604480 262 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RC3H1Q5TC82 UBE3AP2-201ENST00000429033 2259 ntBASIC4.65□□□□□ -1.67
RC3H1Q5TC82 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
RC3H1Q5TC82 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 SNORD114-19-201ENST00000363072 75 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RNU6-647P-201ENST00000364243 107 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 SNORD87-201ENST00000364849 89 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 Y_RNA.361-201ENST00000365515 120 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RNU6-19P-201ENST00000384718 107 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RNA5SP390-201ENST00000410191 113 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 HMGN2P30-201ENST00000423237 256 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RPS26P45-201ENST00000471748 340 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 HMGB1P22-201ENST00000505315 124 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 SNORA31.8-201ENST00000516327 108 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RNU6-638P-201ENST00000516582 104 ntBASIC4.64□□□□□ -1.67
RC3H1Q5TC82 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RC3H1Q5TC82 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RC3H1Q5TC82 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms