Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 AC092047.1-201ENST00000424997 240 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 COX6CP6-201ENST00000490840 228 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 RPL30P5-201ENST00000494923 336 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 RNU2-13P-201ENST00000515909 113 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 SNORA70.12-201ENST00000516084 153 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 RNA5SP367-201ENST00000516557 118 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 AC091905.2-201ENST00000623143 306 ntBASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTC1Q2NKJ3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CTC1Q2NKJ3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNU6-50P-201ENST00000362356 103 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP496-201ENST00000391240 109 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP504-201ENST00000410676 117 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 TOMM22P2-201ENST00000430735 237 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AF228730.3-201ENST00000436691 102 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNU6-437P-201ENST00000459408 95 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RPL23AP54-201ENST00000495129 419 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNU6-857P-201ENST00000515893 110 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 RNU1-103P-201ENST00000516502 125 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AP003357.1-201ENST00000604497 148 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 AC068205.3-201ENST00000636385 468 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 FAM35BP-202ENST00000497389 3337 ntBASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTC1Q2NKJ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 RNU1-15P-201ENST00000353977 144 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.124-201ENST00000363339 93 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.634-201ENST00000364811 113 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.362-201ENST00000365518 110 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 DYNLT3P1-201ENST00000378574 347 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 SNORD116-13-201ENST00000384408 92 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 AC125238.1-201ENST00000448842 249 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 AC005921.1-201ENST00000510589 286 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 AL021707.8-201ENST00000609428 183 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 MIR7151-201ENST00000617477 60 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 MIR6500-201ENST00000622700 86 ntBASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.45□□□□□ -1.7
CTC1Q2NKJ3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AL672296.1-201ENST00000427780 2158 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 MIR302B-201ENST00000362188 73 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP167-201ENST00000365461 116 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 RNU1-63P-201ENST00000383902 164 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 VDAC1P3-201ENST00000434069 851 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AC091826.1-201ENST00000514065 313 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 RNU6-904P-201ENST00000516206 101 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP468-201ENST00000516782 93 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AC068339.1-201ENST00000526965 141 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 AC007256.1-201ENST00000392253 2765 ntBASIC4.44□□□□□ -1.7
CTC1Q2NKJ3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RNU6-600P-201ENST00000362524 99 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP239-201ENST00000410218 129 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP127-201ENST00000411051 133 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RPL37P4-201ENST00000448908 268 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP153-201ENST00000516498 76 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 RPL23AP97-201ENST00000568955 471 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms