Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RNU6-1317P-201ENST00000364582 104 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNU6-439P-201ENST00000384188 106 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNU6-622P-201ENST00000384272 103 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNU6-298P-201ENST00000390888 96 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 SNORA75.2-201ENST00000391138 150 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 SNORA75.3-201ENST00000391231 150 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 Y_RNA.654-201ENST00000497848 106 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC112206.4-201ENST00000515142 405 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNU2-53P-201ENST00000516257 147 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNA5SP67-201ENST00000516422 131 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 RNU5F-4P-201ENST00000516581 114 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC090572.1-201ENST00000519251 160 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 MTND1P36-201ENST00000522384 936 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC027288.2-201ENST00000553028 243 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 PCMTD1P2-201ENST00000565017 355 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 EIF1P4-201ENST00000572664 335 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 MIR4307-201ENST00000582802 84 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC144521.1-201ENST00000607148 956 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.23□□□□□ -2.37
CACNA1EQ15878 PART1_2.1-201ENST00000612397 250 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC078880.5-201ENST00000617845 421 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC112204.3-201ENST00000623822 332 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 AC019226.2-201ENST00000625973 424 ntBASIC0.23□□□□□ -2.37
CACNA1EQ15878 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CACNA1EQ15878 AP000568.1-201ENST00000282964 442 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 SNORD18A-201ENST00000363753 72 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RNA5SP259-201ENST00000365541 109 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MTATP6P20-201ENST00000414147 562 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 COX6CP10-201ENST00000416832 224 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RPL22P18-201ENST00000417197 377 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL117339.3-201ENST00000418733 162 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC139712.2-201ENST00000424302 339 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MTCO2P23-201ENST00000425216 680 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 C8orf59P1-201ENST00000429930 303 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 USP9YP14-201ENST00000430663 563 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 SNRPEP8-201ENST00000442866 260 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL031313.1-201ENST00000448435 256 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RNU7-34P-201ENST00000459394 64 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MTCO2P6-201ENST00000463134 685 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RPS23P5-201ENST00000495419 428 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 UBE2V1P12-201ENST00000503954 474 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CACNA1EQ15878 MIR5695-201ENST00000579717 85 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 MIR544B-201ENST00000582372 78 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AP001180.6-201ENST00000584918 159 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC078795.2-201ENST00000602835 1252 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC018889.1-201ENST00000605372 397 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC027807.2-201ENST00000616099 408 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RMST_4.1-201ENST00000616886 107 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL445523.1-201ENST00000451184 1362 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MIR548B-201ENST00000385247 97 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MTCYBP2-201ENST00000407745 171 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 RNA5SP118-201ENST00000410385 109 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 SNAP23P1-201ENST00000433229 246 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 MTATP6P16-201ENST00000434543 526 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 HSPE1P9-201ENST00000440046 311 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC007969.2-201ENST00000441891 191 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC091021.1-201ENST00000468051 388 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 HMGN1P13-201ENST00000505795 138 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 RNU6-377P-201ENST00000515965 102 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 SNORA25.17-201ENST00000517184 124 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC123904.2-201ENST00000548059 300 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1EQ15878 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC005520.5-201ENST00000613926 164 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AC018926.1-201ENST00000616335 435 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL603839.4-201ENST00000624658 1005 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 AL450472.1-202ENST00000637286 180 ntBASIC0.22□□□□□ -2.37
CACNA1EQ15878 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
CACNA1EQ15878 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
CACNA1EQ15878 MIR340-201ENST00000362125 95 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 Y_RNA.572-201ENST00000384757 98 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 MIR10B-201ENST00000385011 110 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 RNU6-360P-201ENST00000390944 104 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 RNA5SP111-201ENST00000411386 101 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 AL354692.1-201ENST00000423044 315 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1EQ15878 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.21□□□□□ -2.38
CACNA1EQ15878 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1EQ15878 GPR143P-201ENST00000434155 205 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 AL606517.2-201ENST00000442855 241 ntBASIC0.21□□□□□ -2.38
CACNA1EQ15878 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1EQ15878 MTCO2P7-201ENST00000446518 666 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms