Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF72P-201ENST00000425869 1908 ntBASIC1.42□□□□□ -2.18
HMGCS1Q01581 RNU6-227P-201ENST00000362865 103 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 U3.9-201ENST00000363823 204 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 RNU6-457P-201ENST00000363999 107 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 RNU6-1090P-201ENST00000364065 94 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 EIF4E2P1-201ENST00000393781 255 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AL590002.1-201ENST00000406554 418 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 Y_RNA.615-201ENST00000410769 117 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 RNA5SP501-201ENST00000410990 112 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC009310.1-201ENST00000414414 451 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC012306.1-201ENST00000423267 114 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 C8orf59P1-201ENST00000429930 303 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 ERLEC1P1-201ENST00000433806 578 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 snoU13.6-201ENST00000458785 104 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC005741.1-201ENST00000511094 432 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 EIF4A1P12-201ENST00000551910 141 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC021231.3-201ENST00000558497 370 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC015720.1-201ENST00000565251 277 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 CTHRC1P1-201ENST00000605383 469 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC004492.1-201ENST00000607036 742 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AL022345.1-201ENST00000607292 135 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC104458.1-201ENST00000608243 463 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AL590240.4-201ENST00000616908 390 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGCS1Q01581 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AC121333.1-201ENST00000567488 2709 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HMGCS1Q01581 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
HMGCS1Q01581 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCS1Q01581 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 Y_RNA.332-201ENST00000365271 113 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 Y_RNA.373-201ENST00000365600 103 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 SNORA12.2-201ENST00000391040 156 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 SNORA17.3-201ENST00000391159 129 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCS1Q01581 MIR208B-201ENST00000401172 77 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 MIR450B-201ENST00000401182 78 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AL357139.1-201ENST00000407792 426 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 ARL5AP1-201ENST00000418991 388 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 SNRPEP8-201ENST00000442866 260 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC007547.1-201ENST00000462177 490 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC132942.1-201ENST00000486753 483 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC105313.1-201ENST00000509121 353 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC096745.1-201ENST00000509945 370 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 RNU6-1098P-201ENST00000516772 96 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 SCOCP1-201ENST00000554676 349 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC097065.2-201ENST00000608159 533 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 DISC2.1-201ENST00000612827 205 ntBASIC1.4□□□□□ -2.19
HMGCS1Q01581 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 FER-210ENST00000628534 558 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCS1Q01581 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMGCS1Q01581 MIR340-201ENST00000362125 95 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU6-1252P-201ENST00000363054 104 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU6-254P-201ENST00000363377 107 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU4-13P-201ENST00000364019 141 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 RNU6-325P-201ENST00000411132 105 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 FTH1P25-201ENST00000447665 469 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 TOMM22P6-201ENST00000465035 409 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 Y_RNA.665-201ENST00000516177 98 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 MIR3169-201ENST00000578032 83 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 MIR3124-201ENST00000582636 67 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 CYP2C61P-201ENST00000604072 290 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC016925.2-201ENST00000605108 242 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC009994.1-201ENST00000606889 253 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC005520.5-201ENST00000613926 164 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC015540.1-201ENST00000615828 501 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 MIR1321-201ENST00000637766 79 ntBASIC1.39□□□□□ -2.19
HMGCS1Q01581 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGCS1Q01581 LINC02555-201ENST00000563933 1951 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-451P-201ENST00000362921 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms