Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNU4-56P-201ENST00000364700 142 ntBASIC3.03□□□□□ -1.92
PER3P56645 MIR1302-6-201ENST00000408466 90 ntBASIC3.03□□□□□ -1.92
PER3P56645 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
PER3P56645 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.03□□□□□ -1.92
PER3P56645 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.03□□□□□ -1.92
PER3P56645 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.03□□□□□ -1.92
PER3P56645 AL357552.1-201ENST00000445254 415 ntBASIC3.03□□□□□ -1.92
PER3P56645 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
PER3P56645 SNORA70.19-201ENST00000516717 90 ntBASIC3.03□□□□□ -1.92
PER3P56645 RNU6-570P-201ENST00000517051 105 ntBASIC3.03□□□□□ -1.92
PER3P56645 Y_RNA.772-201ENST00000606692 102 ntBASIC3.03□□□□□ -1.92
PER3P56645 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PER3P56645 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PER3P56645 LINC02555-201ENST00000563933 1951 ntBASIC3.02□□□□□ -1.93
PER3P56645 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PER3P56645 snoU2_19.1-201ENST00000362361 80 ntBASIC3.02□□□□□ -1.93
PER3P56645 Y_RNA.188-201ENST00000363952 111 ntBASIC3.02□□□□□ -1.93
PER3P56645 Y_RNA.307-201ENST00000365022 117 ntBASIC3.02□□□□□ -1.93
PER3P56645 RNU6-937P-201ENST00000384325 106 ntBASIC3.02□□□□□ -1.93
PER3P56645 RPL21P3-201ENST00000395517 478 ntBASIC3.02□□□□□ -1.93
PER3P56645 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
PER3P56645 Y_RNA.618-201ENST00000410949 107 ntBASIC3.02□□□□□ -1.93
PER3P56645 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
PER3P56645 SNORD127-201ENST00000458892 86 ntBASIC3.02□□□□□ -1.93
PER3P56645 AC146507.2-201ENST00000460608 476 ntBASIC3.02□□□□□ -1.93
PER3P56645 AC145146.1-201ENST00000496370 254 ntBASIC3.02□□□□□ -1.93
PER3P56645 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.02□□□□□ -1.93
PER3P56645 SNORA25.14-201ENST00000516481 132 ntBASIC3.02□□□□□ -1.93
PER3P56645 Y_RNA.713-201ENST00000517013 96 ntBASIC3.02□□□□□ -1.93
PER3P56645 SCARNA11.3-201ENST00000517276 130 ntBASIC3.02□□□□□ -1.93
PER3P56645 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.02□□□□□ -1.93
PER3P56645 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.02□□□□□ -1.93
PER3P56645 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.02□□□□□ -1.93
PER3P56645 MIR4765-201ENST00000585007 77 ntBASIC3.02□□□□□ -1.93
PER3P56645 MZT1P2-201ENST00000604387 248 ntBASIC3.02□□□□□ -1.93
PER3P56645 MIR376A1-201ENST00000616574 68 ntBASIC3.02□□□□□ -1.93
PER3P56645 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PER3P56645 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PER3P56645 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
PER3P56645 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.02□□□□□ -1.93
PER3P56645 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PER3P56645 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PER3P56645 RNU1-72P-201ENST00000362976 153 ntBASIC3.01□□□□□ -1.93
PER3P56645 Y_RNA.84-201ENST00000363011 104 ntBASIC3.01□□□□□ -1.93
PER3P56645 RNU6-961P-201ENST00000363893 105 ntBASIC3.01□□□□□ -1.93
PER3P56645 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
PER3P56645 RNA5SP139-201ENST00000364340 117 ntBASIC3.01□□□□□ -1.93
PER3P56645 Y_RNA.518-201ENST00000384552 113 ntBASIC3.01□□□□□ -1.93
PER3P56645 RN7SKP284-201ENST00000411002 343 ntBASIC3.01□□□□□ -1.93
PER3P56645 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.01□□□□□ -1.93
PER3P56645 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
PER3P56645 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
PER3P56645 AC091179.1-201ENST00000461606 579 ntBASIC3.01□□□□□ -1.93
PER3P56645 MTND1P19-201ENST00000511780 315 ntBASIC3.01□□□□□ -1.93
PER3P56645 Y_RNA.680-201ENST00000516441 93 ntBASIC3.01□□□□□ -1.93
PER3P56645 RNU6-1271P-201ENST00000517049 105 ntBASIC3.01□□□□□ -1.93
PER3P56645 DEFB131C-201ENST00000528817 165 ntBASIC3.01□□□□□ -1.93
PER3P56645 EIF4A1P12-201ENST00000551910 141 ntBASIC3.01□□□□□ -1.93
PER3P56645 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.01□□□□□ -1.93
PER3P56645 AL356575.1-201ENST00000603008 283 ntBASIC3.01□□□□□ -1.93
PER3P56645 AC010999.1-201ENST00000611856 324 ntBASIC3.01□□□□□ -1.93
PER3P56645 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.01□□□□□ -1.93
PER3P56645 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
PER3P56645 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PER3P56645 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 AC010615.1-201ENST00000594254 1764 ntBASIC3□□□□□ -1.93
PER3P56645 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3□□□□□ -1.93
PER3P56645 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PER3P56645 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 RNA5SP197-201ENST00000363357 119 ntBASIC3□□□□□ -1.93
PER3P56645 SNORA80A-201ENST00000363922 136 ntBASIC3□□□□□ -1.93
PER3P56645 Y_RNA.288-201ENST00000364854 92 ntBASIC3□□□□□ -1.93
PER3P56645 RNU6-1027P-201ENST00000383998 107 ntBASIC3□□□□□ -1.93
PER3P56645 RNU6-1083P-201ENST00000384022 107 ntBASIC3□□□□□ -1.93
PER3P56645 SNORA46.1-201ENST00000391069 153 ntBASIC3□□□□□ -1.93
PER3P56645 AL357075.1-201ENST00000404107 726 ntBASIC3□□□□□ -1.93
PER3P56645 RNU6-1203P-201ENST00000410703 110 ntBASIC3□□□□□ -1.93
PER3P56645 RNU2-38P-201ENST00000410856 79 ntBASIC3□□□□□ -1.93
PER3P56645 AC004866.1-201ENST00000411748 78 ntBASIC3□□□□□ -1.93
PER3P56645 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3□□□□□ -1.93
PER3P56645 AC026333.2-201ENST00000542164 106 ntBASIC3□□□□□ -1.93
PER3P56645 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3□□□□□ -1.93
PER3P56645 AC103810.1-201ENST00000579873 453 ntBASIC3□□□□□ -1.93
PER3P56645 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3□□□□□ -1.93
PER3P56645 AP001282.2-201ENST00000616149 309 ntBASIC3□□□□□ -1.93
PER3P56645 AC018692.3-201ENST00000623929 123 ntBASIC3□□□□□ -1.93
PER3P56645 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3□□□□□ -1.93
PER3P56645 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.99□□□□□ -1.93
PER3P56645 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.99□□□□□ -1.93
PER3P56645 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
PER3P56645 RNU6-245P-201ENST00000384020 107 ntBASIC2.99□□□□□ -1.93
PER3P56645 SNORA12-201ENST00000391162 147 ntBASIC2.99□□□□□ -1.93
PER3P56645 RNU2-25P-201ENST00000411041 191 ntBASIC2.99□□□□□ -1.93
PER3P56645 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.99□□□□□ -1.93
PER3P56645 RNU6-1132P-201ENST00000459214 107 ntBASIC2.99□□□□□ -1.93
PER3P56645 AC091179.3-201ENST00000474761 144 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms