Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 Y_RNA.504-201ENST00000384481 104 ntBASIC1.93□□□□□ -2.1
PEX3P56589 RNU6-510P-201ENST00000391239 108 ntBASIC1.93□□□□□ -2.1
PEX3P56589 BTF3L4P2-201ENST00000392798 346 ntBASIC1.93□□□□□ -2.1
PEX3P56589 PDCL2P1-201ENST00000419302 352 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.93□□□□□ -2.1
PEX3P56589 SNRPGP7-201ENST00000469016 106 ntBASIC1.93□□□□□ -2.1
PEX3P56589 MTND5P5-201ENST00000503764 376 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AC114801.2-201ENST00000503825 781 ntBASIC1.93□□□□□ -2.1
PEX3P56589 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.93□□□□□ -2.1
PEX3P56589 SNORA20.3-201ENST00000516880 132 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AC034114.1-201ENST00000520293 285 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.93□□□□□ -2.1
PEX3P56589 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
PEX3P56589 MIR3976-201ENST00000606807 139 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AL022345.1-201ENST00000607292 135 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AC090517.3-201ENST00000625170 141 ntBASIC1.93□□□□□ -2.1
PEX3P56589 AC099654.14-201ENST00000638599 341 ntBASIC1.93□□□□□ -2.1
PEX3P56589 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PEX3P56589 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PEX3P56589 RNU6-1013P-201ENST00000384180 107 ntBASIC1.92□□□□□ -2.1
PEX3P56589 MIR517A-201ENST00000385001 87 ntBASIC1.92□□□□□ -2.1
PEX3P56589 MIR561-201ENST00000385216 97 ntBASIC1.92□□□□□ -2.1
PEX3P56589 MIR548K-201ENST00000408406 116 ntBASIC1.92□□□□□ -2.1
PEX3P56589 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
PEX3P56589 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AF186996.7-201ENST00000492781 209 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC145146.1-201ENST00000496370 254 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC021146.2-201ENST00000504736 556 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC046134.1-201ENST00000514454 666 ntBASIC1.92□□□□□ -2.1
PEX3P56589 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC022616.8-201ENST00000533569 253 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PEX3P56589 FGF7P1-201ENST00000582820 288 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AL670379.2-201ENST00000604983 252 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC009994.1-201ENST00000606889 253 ntBASIC1.92□□□□□ -2.1
PEX3P56589 PCGEM1.1-201ENST00000613431 131 ntBASIC1.92□□□□□ -2.1
PEX3P56589 AC022306.2-201ENST00000617563 647 ntBASIC1.92□□□□□ -2.1
PEX3P56589 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PEX3P56589 Y_RNA.123-201ENST00000363338 102 ntBASIC1.91□□□□□ -2.1
PEX3P56589 Y_RNA.160-201ENST00000363677 92 ntBASIC1.91□□□□□ -2.1
PEX3P56589 Y_RNA.184-201ENST00000363884 108 ntBASIC1.91□□□□□ -2.1
PEX3P56589 SNORA29-201ENST00000384183 140 ntBASIC1.91□□□□□ -2.1
PEX3P56589 SNORA12-201ENST00000391162 147 ntBASIC1.91□□□□□ -2.1
PEX3P56589 Y_RNA.597-201ENST00000410463 100 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC138393.2-201ENST00000414742 246 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RPL21P111-201ENST00000418453 477 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.91□□□□□ -2.1
PEX3P56589 MTND4LP16-201ENST00000440828 295 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
PEX3P56589 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.91□□□□□ -2.1
PEX3P56589 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
PEX3P56589 PCMTD1P1-201ENST00000455560 355 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RPL31P58-201ENST00000469001 379 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.91□□□□□ -2.1
PEX3P56589 AC116353.2-201ENST00000505332 712 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RNU6-273P-201ENST00000516937 96 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.91□□□□□ -2.1
PEX3P56589 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.91□□□□□ -2.1
PEX3P56589 MRPS36P4-201ENST00000534436 298 ntBASIC1.91□□□□□ -2.1
PEX3P56589 CYP4A27P-201ENST00000567218 190 ntBASIC1.91□□□□□ -2.1
PEX3P56589 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
PEX3P56589 AC011712.1-201ENST00000588959 234 ntBASIC1.91□□□□□ -2.1
PEX3P56589 RNU6-845P-201ENST00000362578 103 ntBASIC1.9□□□□□ -2.11
PEX3P56589 RNU6-596P-201ENST00000365395 98 ntBASIC1.9□□□□□ -2.11
PEX3P56589 RNU6-767P-201ENST00000384132 107 ntBASIC1.9□□□□□ -2.11
PEX3P56589 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
PEX3P56589 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PEX3P56589 RN7SKP158-201ENST00000410453 326 ntBASIC1.9□□□□□ -2.11
PEX3P56589 AC012306.1-201ENST00000423267 114 ntBASIC1.9□□□□□ -2.11
PEX3P56589 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.9□□□□□ -2.11
PEX3P56589 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.9□□□□□ -2.11
PEX3P56589 SNORD5.1-201ENST00000458800 75 ntBASIC1.9□□□□□ -2.11
PEX3P56589 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.9□□□□□ -2.11
PEX3P56589 PRDX4P1-201ENST00000507189 574 ntBASIC1.9□□□□□ -2.11
PEX3P56589 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
PEX3P56589 Y_RNA.691-201ENST00000516611 103 ntBASIC1.9□□□□□ -2.11
PEX3P56589 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.9□□□□□ -2.11
PEX3P56589 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.9□□□□□ -2.11
PEX3P56589 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.9□□□□□ -2.11
PEX3P56589 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.9□□□□□ -2.11
PEX3P56589 AC124303.1-201ENST00000605703 360 ntBASIC1.9□□□□□ -2.11
PEX3P56589 AC093913.1-201ENST00000614178 329 ntBASIC1.9□□□□□ -2.11
PEX3P56589 AC063943.3-201ENST00000615562 356 ntBASIC1.9□□□□□ -2.11
PEX3P56589 MIR1248-201ENST00000629190 106 ntBASIC1.9□□□□□ -2.11
PEX3P56589 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
PEX3P56589 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.9□□□□□ -2.11
PEX3P56589 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
PEX3P56589 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PEX3P56589 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PEX3P56589 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PEX3P56589 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-546P-201ENST00000383991 107 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
PEX3P56589 RNU6-378P-201ENST00000384324 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms