Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL138963.2-201ENST00000605137 226 ntBASIC2.55□□□□□ -2
HDAC4P56524 AC080078.3-201ENST00000605407 463 ntBASIC2.55□□□□□ -2
HDAC4P56524 MIR5701-2-201ENST00000615634 82 ntBASIC2.55□□□□□ -2
HDAC4P56524 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
HDAC4P56524 SNORD98-201ENST00000636377 67 ntBASIC2.55□□□□□ -2
HDAC4P56524 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
HDAC4P56524 RNU6-1115P-201ENST00000362490 106 ntBASIC2.54□□□□□ -2
HDAC4P56524 RNU6-1286P-201ENST00000383871 107 ntBASIC2.54□□□□□ -2
HDAC4P56524 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
HDAC4P56524 SNORA41-201ENST00000384675 132 ntBASIC2.54□□□□□ -2
HDAC4P56524 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
HDAC4P56524 AC009963.1-201ENST00000417265 157 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.54□□□□□ -2
HDAC4P56524 AC007677.1-201ENST00000445757 515 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL353752.1-201ENST00000454946 260 ntBASIC2.54□□□□□ -2
HDAC4P56524 Y_RNA.639-201ENST00000458981 102 ntBASIC2.54□□□□□ -2
HDAC4P56524 MIR2053-201ENST00000459295 91 ntBASIC2.54□□□□□ -2
HDAC4P56524 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.54□□□□□ -2
HDAC4P56524 AC021231.3-201ENST00000558497 370 ntBASIC2.54□□□□□ -2
HDAC4P56524 MIR4273-201ENST00000582824 84 ntBASIC2.54□□□□□ -2
HDAC4P56524 AC044792.1-201ENST00000593294 196 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL034555.1-201ENST00000604816 211 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL080274.1-201ENST00000605565 220 ntBASIC2.54□□□□□ -2
HDAC4P56524 MIR6840-201ENST00000611937 71 ntBASIC2.54□□□□□ -2
HDAC4P56524 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.54□□□□□ -2
HDAC4P56524 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDAC4P56524 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HDAC4P56524 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC4P56524 MIR369-201ENST00000362155 70 ntBASIC2.53□□□□□ -2
HDAC4P56524 Y_RNA.5-201ENST00000362334 102 ntBASIC2.53□□□□□ -2
HDAC4P56524 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
HDAC4P56524 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
HDAC4P56524 RNU6-1040P-201ENST00000383974 107 ntBASIC2.53□□□□□ -2
HDAC4P56524 Y_RNA.431-201ENST00000384086 102 ntBASIC2.53□□□□□ -2
HDAC4P56524 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
HDAC4P56524 AL590135.1-201ENST00000422215 156 ntBASIC2.53□□□□□ -2
HDAC4P56524 AC019205.3-201ENST00000424573 156 ntBASIC2.53□□□□□ -2
HDAC4P56524 AL353997.1-201ENST00000432936 108 ntBASIC2.53□□□□□ -2
HDAC4P56524 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
HDAC4P56524 IPO7P1-201ENST00000442031 636 ntBASIC2.53□□□□□ -2
HDAC4P56524 AC016700.2-201ENST00000446011 156 ntBASIC2.53□□□□□ -2
HDAC4P56524 CYP2C59P-201ENST00000457790 269 ntBASIC2.53□□□□□ -2
HDAC4P56524 snoU13.15-201ENST00000459407 104 ntBASIC2.53□□□□□ -2
HDAC4P56524 RPL23AP75-201ENST00000491601 451 ntBASIC2.53□□□□□ -2
HDAC4P56524 AC015911.1-201ENST00000495111 156 ntBASIC2.53□□□□□ -2
HDAC4P56524 HMGB1P35-201ENST00000503360 598 ntBASIC2.53□□□□□ -2
HDAC4P56524 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.53□□□□□ -2
HDAC4P56524 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.53□□□□□ -2
HDAC4P56524 RNU6-470P-201ENST00000515954 104 ntBASIC2.53□□□□□ -2
HDAC4P56524 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.53□□□□□ -2
HDAC4P56524 Y_RNA.676-201ENST00000516393 96 ntBASIC2.53□□□□□ -2
HDAC4P56524 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
HDAC4P56524 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC4P56524 AL356055.1-201ENST00000602528 446 ntBASIC2.53□□□□□ -2
HDAC4P56524 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.53□□□□□ -2
HDAC4P56524 ZNF299P-201ENST00000406845 1804 ntBASIC2.53□□□□□ -2
HDAC4P56524 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC4P56524 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.52□□□□□ -2.01
HDAC4P56524 Y_RNA.132-201ENST00000363421 102 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 RNU4-56P-201ENST00000364700 142 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 Y_RNA.395-201ENST00000383945 109 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 RNU6-474P-201ENST00000384243 107 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 Y_RNA.463-201ENST00000384271 102 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 Y_RNA.496-201ENST00000384444 101 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC4P56524 MTCYBP6-201ENST00000441810 138 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AL139109.1-201ENST00000455491 297 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AC090515.1-201ENST00000465295 476 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AC021146.2-201ENST00000504736 556 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AC022493.2-201ENST00000506122 481 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.52□□□□□ -2.01
HDAC4P56524 CBX3P7-201ENST00000532876 502 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AL713866.2-201ENST00000603579 219 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AL355297.2-201ENST00000604792 129 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 AC243829.7-201ENST00000633081 225 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC4P56524 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC4P56524 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 MTND5P10-201ENST00000603719 1809 ntBASIC2.52□□□□□ -2.01
HDAC4P56524 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HDAC4P56524 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HDAC4P56524 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HDAC4P56524 AC233981.2-201ENST00000611524 1614 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 RNU6-874P-201ENST00000362390 105 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 RNY1P16-201ENST00000363063 111 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 Y_RNA.146-201ENST00000363549 102 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 Y_RNA.197-201ENST00000364004 102 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 MIR487A-201ENST00000385009 80 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 MRPS18CP6-201ENST00000423587 223 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC4P56524 MTCO3P29-201ENST00000432119 779 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC4P56524 snoU13.6-201ENST00000458785 104 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms