Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 U2.17-201ENST00000611454 95 ntBASIC1.41□□□□□ -2.18
CDH4P55283 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.41□□□□□ -2.18
CDH4P55283 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH4P55283 AC068205.3-201ENST00000636385 468 ntBASIC1.41□□□□□ -2.18
CDH4P55283 AL159152.1-201ENST00000635019 2587 ntBASIC1.41□□□□□ -2.18
CDH4P55283 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
CDH4P55283 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CDH4P55283 SNORA7.1-201ENST00000363750 139 ntBASIC1.4□□□□□ -2.19
CDH4P55283 SNORD31B-201ENST00000364977 69 ntBASIC1.4□□□□□ -2.19
CDH4P55283 Y_RNA.595-201ENST00000410403 105 ntBASIC1.4□□□□□ -2.19
CDH4P55283 RNU4-55P-201ENST00000410731 137 ntBASIC1.4□□□□□ -2.19
CDH4P55283 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
CDH4P55283 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH4P55283 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH4P55283 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
CDH4P55283 MTND4P7-201ENST00000523876 130 ntBASIC1.4□□□□□ -2.19
CDH4P55283 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH4P55283 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH4P55283 MTND1P15-201ENST00000579262 949 ntBASIC1.4□□□□□ -2.19
CDH4P55283 MIR3611-201ENST00000584484 83 ntBASIC1.4□□□□□ -2.19
CDH4P55283 AC004223.2-201ENST00000590309 544 ntBASIC1.4□□□□□ -2.19
CDH4P55283 snoU13.31-201ENST00000607291 104 ntBASIC1.4□□□□□ -2.19
CDH4P55283 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH4P55283 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
CDH4P55283 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
CDH4P55283 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH4P55283 EBAG9P1-201ENST00000418955 543 ntBASIC1.39□□□□□ -2.19
CDH4P55283 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
CDH4P55283 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH4P55283 AC008628.2-201ENST00000502605 298 ntBASIC1.39□□□□□ -2.19
CDH4P55283 SNORA14.1-201ENST00000516113 141 ntBASIC1.39□□□□□ -2.19
CDH4P55283 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
CDH4P55283 MTND2P38-201ENST00000522536 667 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH4P55283 AC104383.1-201ENST00000530297 370 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AP003034.1-201ENST00000534621 422 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AL118558.2-201ENST00000556294 238 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.39□□□□□ -2.19
CDH4P55283 SNORA59B-202ENST00000578183 701 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AC069114.2-201ENST00000604699 304 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AC245008.1-201ENST00000608123 476 ntBASIC1.39□□□□□ -2.19
CDH4P55283 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDH4P55283 MIR8063-201ENST00000621930 81 ntBASIC1.39□□□□□ -2.19
CDH4P55283 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH4P55283 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDH4P55283 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CDH4P55283 RNU6-38P-201ENST00000384085 107 ntBASIC1.38□□□□□ -2.19
CDH4P55283 MIR520A-201ENST00000384862 85 ntBASIC1.38□□□□□ -2.19
CDH4P55283 SNORD73A-201ENST00000386062 65 ntBASIC1.38□□□□□ -2.19
CDH4P55283 RNA5SP219-201ENST00000390940 113 ntBASIC1.38□□□□□ -2.19
CDH4P55283 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
CDH4P55283 FGF7P8-201ENST00000402994 292 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AL606923.1-201ENST00000406616 190 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH4P55283 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH4P55283 USP9YP14-201ENST00000430663 563 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
CDH4P55283 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
CDH4P55283 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AC016925.1-201ENST00000458303 298 ntBASIC1.38□□□□□ -2.19
CDH4P55283 RPL9P9-202ENST00000466501 579 ntBASIC1.38□□□□□ -2.19
CDH4P55283 MTCO3P38-201ENST00000468910 766 ntBASIC1.38□□□□□ -2.19
CDH4P55283 RPS23P5-201ENST00000495419 428 ntBASIC1.38□□□□□ -2.19
CDH4P55283 MTCYBP18-201ENST00000501056 747 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH4P55283 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.38□□□□□ -2.19
CDH4P55283 SNORD60.2-201ENST00000516883 86 ntBASIC1.38□□□□□ -2.19
CDH4P55283 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH4P55283 MIR4498-201ENST00000577599 66 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH4P55283 AC068792.1-201ENST00000621354 417 ntBASIC1.38□□□□□ -2.19
CDH4P55283 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH4P55283 AC139792.3-201ENST00000623525 224 ntBASIC1.38□□□□□ -2.19
CDH4P55283 SNORA43.4-201ENST00000629559 138 ntBASIC1.38□□□□□ -2.19
CDH4P55283 MTND5P26-201ENST00000426018 1752 ntBASIC1.38□□□□□ -2.19
CDH4P55283 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CDH4P55283 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDH4P55283 AC100821.1-201ENST00000523153 2479 ntBASIC1.37□□□□□ -2.19
CDH4P55283 Y_RNA.51-201ENST00000362725 102 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU6-862P-201ENST00000362804 105 ntBASIC1.37□□□□□ -2.19
CDH4P55283 Y_RNA.132-201ENST00000363421 102 ntBASIC1.37□□□□□ -2.19
CDH4P55283 Y_RNA.409-201ENST00000383990 98 ntBASIC1.37□□□□□ -2.19
CDH4P55283 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU6-1106P-201ENST00000390845 107 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU2-66P-201ENST00000410650 161 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AL663109.1-201ENST00000411498 844 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC012306.1-201ENST00000423267 114 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH4P55283 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH4P55283 AC099677.2-201ENST00000436385 175 ntBASIC1.37□□□□□ -2.19
CDH4P55283 MTCO2P3-201ENST00000442543 421 ntBASIC1.37□□□□□ -2.19
CDH4P55283 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.37□□□□□ -2.19
CDH4P55283 AC007395.1-201ENST00000451333 677 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
CDH4P55283 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms