Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
COPAP53621 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.84□□□□□ -1.95
COPAP53621 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.84□□□□□ -1.95
COPAP53621 AC091144.1-201ENST00000519573 138 ntBASIC2.84□□□□□ -1.95
COPAP53621 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.84□□□□□ -1.95
COPAP53621 AL355802.3-201ENST00000607571 545 ntBASIC2.84□□□□□ -1.95
COPAP53621 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.84□□□□□ -1.95
COPAP53621 AL606534.2-204ENST00000635008 178 ntBASIC2.84□□□□□ -1.95
COPAP53621 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.96
COPAP53621 AC005592.1-201ENST00000566527 1640 ntBASIC2.83□□□□□ -1.96
COPAP53621 RNU4-42P-201ENST00000364738 142 ntBASIC2.83□□□□□ -1.96
COPAP53621 RNA5SP126-201ENST00000365092 109 ntBASIC2.83□□□□□ -1.96
COPAP53621 RNU6-1160P-201ENST00000384546 104 ntBASIC2.83□□□□□ -1.96
COPAP53621 MIR32-201ENST00000384965 70 ntBASIC2.83□□□□□ -1.96
COPAP53621 MIR153-2-201ENST00000385225 87 ntBASIC2.83□□□□□ -1.96
COPAP53621 snosnR66.1-201ENST00000391095 99 ntBASIC2.83□□□□□ -1.96
COPAP53621 AL139095.1-201ENST00000404326 391 ntBASIC2.83□□□□□ -1.96
COPAP53621 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.83□□□□□ -1.96
COPAP53621 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.83□□□□□ -1.96
COPAP53621 RNU7-87P-201ENST00000459343 62 ntBASIC2.83□□□□□ -1.96
COPAP53621 RNU7-169P-201ENST00000459456 61 ntBASIC2.83□□□□□ -1.96
COPAP53621 TOMM22P6-201ENST00000465035 409 ntBASIC2.83□□□□□ -1.96
COPAP53621 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.83□□□□□ -1.96
COPAP53621 HSBP1P1-201ENST00000555205 166 ntBASIC2.83□□□□□ -1.96
COPAP53621 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.83□□□□□ -1.96
COPAP53621 CYP4A27P-201ENST00000567218 190 ntBASIC2.83□□□□□ -1.96
COPAP53621 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.83□□□□□ -1.96
COPAP53621 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.83□□□□□ -1.96
COPAP53621 AC010928.2-201ENST00000588017 287 ntBASIC2.83□□□□□ -1.96
COPAP53621 AL360085.1-201ENST00000604713 532 ntBASIC2.83□□□□□ -1.96
COPAP53621 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.83□□□□□ -1.96
COPAP53621 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COPAP53621 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COPAP53621 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COPAP53621 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
COPAP53621 Y_RNA.80-201ENST00000362996 102 ntBASIC2.82□□□□□ -1.96
COPAP53621 Y_RNA.158-201ENST00000363651 101 ntBASIC2.82□□□□□ -1.96
COPAP53621 SNORA67.1-201ENST00000364749 141 ntBASIC2.82□□□□□ -1.96
COPAP53621 MIR512-1-201ENST00000384913 84 ntBASIC2.82□□□□□ -1.96
COPAP53621 MIR628-201ENST00000385229 95 ntBASIC2.82□□□□□ -1.96
COPAP53621 MIR524-201ENST00000385242 87 ntBASIC2.82□□□□□ -1.96
COPAP53621 MIR208B-201ENST00000401172 77 ntBASIC2.82□□□□□ -1.96
COPAP53621 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
COPAP53621 AC080013.2-201ENST00000460866 323 ntBASIC2.82□□□□□ -1.96
COPAP53621 RN7SL429P-201ENST00000479090 223 ntBASIC2.82□□□□□ -1.96
COPAP53621 RN7SL489P-201ENST00000486185 223 ntBASIC2.82□□□□□ -1.96
COPAP53621 RN7SL327P-201ENST00000488659 223 ntBASIC2.82□□□□□ -1.96
COPAP53621 CKS1BP2-201ENST00000497342 240 ntBASIC2.82□□□□□ -1.96
COPAP53621 RNU6-475P-201ENST00000516073 104 ntBASIC2.82□□□□□ -1.96
COPAP53621 RNU6-327P-201ENST00000516270 127 ntBASIC2.82□□□□□ -1.96
COPAP53621 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
COPAP53621 RNU4-77P-201ENST00000516692 156 ntBASIC2.82□□□□□ -1.96
COPAP53621 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.82□□□□□ -1.96
COPAP53621 RN7SL853P-201ENST00000617250 223 ntBASIC2.82□□□□□ -1.96
COPAP53621 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.82□□□□□ -1.96
COPAP53621 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COPAP53621 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 RNU4-15P-201ENST00000362613 141 ntBASIC2.81□□□□□ -1.96
COPAP53621 RNY3P11-201ENST00000364153 102 ntBASIC2.81□□□□□ -1.96
COPAP53621 RNU6-17P-201ENST00000384245 107 ntBASIC2.81□□□□□ -1.96
COPAP53621 RNU6-301P-201ENST00000384277 107 ntBASIC2.81□□□□□ -1.96
COPAP53621 RNU6-18P-201ENST00000384527 107 ntBASIC2.81□□□□□ -1.96
COPAP53621 MIR9-1-201ENST00000385198 89 ntBASIC2.81□□□□□ -1.96
COPAP53621 HMGB3P2-201ENST00000411913 584 ntBASIC2.81□□□□□ -1.96
COPAP53621 MTND2P23-201ENST00000422990 651 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.81□□□□□ -1.96
COPAP53621 AC096644.2-201ENST00000429278 159 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.81□□□□□ -1.96
COPAP53621 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 AC090515.1-201ENST00000465295 476 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC145146.1-201ENST00000496370 254 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 RNU6-826P-201ENST00000516827 104 ntBASIC2.81□□□□□ -1.96
COPAP53621 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.81□□□□□ -1.96
COPAP53621 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 AC006600.1-201ENST00000572529 153 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC005034.5-201ENST00000604219 466 ntBASIC2.81□□□□□ -1.96
COPAP53621 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 MIR4272-201ENST00000635924 64 ntBASIC2.81□□□□□ -1.96
COPAP53621 AC069528.2-201ENST00000624849 1991 ntBASIC2.81□□□□□ -1.96
COPAP53621 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COPAP53621 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
COPAP53621 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
COPAP53621 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COPAP53621 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COPAP53621 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.81□□□□□ -1.96
COPAP53621 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPAP53621 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.8□□□□□ -1.96
COPAP53621 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
COPAP53621 RNU1-72P-201ENST00000362976 153 ntBASIC2.8□□□□□ -1.96
COPAP53621 Y_RNA.424-201ENST00000384063 103 ntBASIC2.8□□□□□ -1.96
COPAP53621 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
COPAP53621 RNU6-541P-201ENST00000384709 110 ntBASIC2.8□□□□□ -1.96
COPAP53621 MIR29B2-201ENST00000385055 81 ntBASIC2.8□□□□□ -1.96
COPAP53621 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
COPAP53621 RNU6-1093P-201ENST00000391194 107 ntBASIC2.8□□□□□ -1.96
COPAP53621 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
COPAP53621 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
COPAP53621 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.8□□□□□ -1.96
COPAP53621 AC114482.1-201ENST00000418010 247 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms