Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RPS29P2-201ENST00000479278 136 ntBASIC3.58□□□□□ -1.84
CDR1P51861 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.58□□□□□ -1.84
CDR1P51861 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.58□□□□□ -1.84
CDR1P51861 MIR5571-201ENST00000577998 113 ntBASIC3.58□□□□□ -1.84
CDR1P51861 AL138963.2-201ENST00000605137 226 ntBASIC3.58□□□□□ -1.84
CDR1P51861 AC022441.3-201ENST00000605737 136 ntBASIC3.58□□□□□ -1.84
CDR1P51861 AC073476.4-201ENST00000628409 72 ntBASIC3.58□□□□□ -1.84
CDR1P51861 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
CDR1P51861 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.58□□□□□ -1.84
CDR1P51861 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.58□□□□□ -1.84
CDR1P51861 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.58□□□□□ -1.84
CDR1P51861 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDR1P51861 RNU4-56P-201ENST00000364700 142 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RNU6-898P-201ENST00000365627 104 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RNU6-1181P-201ENST00000384191 106 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RNU6-140P-201ENST00000384566 108 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RNU6-658P-201ENST00000384606 106 ntBASIC3.57□□□□□ -1.84
CDR1P51861 U3.19-201ENST00000390893 196 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RNU6-1154P-201ENST00000391001 104 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AL357139.1-201ENST00000407792 426 ntBASIC3.57□□□□□ -1.84
CDR1P51861 RPL32P35-201ENST00000415214 394 ntBASIC3.57□□□□□ -1.84
CDR1P51861 ZNF204P-201ENST00000416749 2397 ntBASIC3.57□□□□□ -1.84
CDR1P51861 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.57□□□□□ -1.84
CDR1P51861 MTATP6P7-201ENST00000453315 681 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.57□□□□□ -1.84
CDR1P51861 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AC140059.1-201ENST00000489238 361 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.57□□□□□ -1.84
CDR1P51861 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
CDR1P51861 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
CDR1P51861 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDR1P51861 AL109809.4-201ENST00000603520 2185 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AL049781.1-201ENST00000623195 3585 ntBASIC3.56□□□□□ -1.84
CDR1P51861 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDR1P51861 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDR1P51861 RNU6-211P-201ENST00000384047 107 ntBASIC3.56□□□□□ -1.84
CDR1P51861 SNORD116-20-201ENST00000384529 92 ntBASIC3.56□□□□□ -1.84
CDR1P51861 RNU6-417P-201ENST00000384712 107 ntBASIC3.56□□□□□ -1.84
CDR1P51861 Y_RNA.568-201ENST00000384742 113 ntBASIC3.56□□□□□ -1.84
CDR1P51861 Y_RNA.571-201ENST00000384753 98 ntBASIC3.56□□□□□ -1.84
CDR1P51861 RNU6-131P-201ENST00000391144 107 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AL357075.1-201ENST00000404107 726 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AL358075.3-201ENST00000426289 226 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AL162725.1-201ENST00000435405 301 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.56□□□□□ -1.84
CDR1P51861 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.56□□□□□ -1.84
CDR1P51861 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AC097462.2-201ENST00000504623 481 ntBASIC3.56□□□□□ -1.84
CDR1P51861 FCF1P8-201ENST00000510322 597 ntBASIC3.56□□□□□ -1.84
CDR1P51861 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.56□□□□□ -1.84
CDR1P51861 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.56□□□□□ -1.84
CDR1P51861 AC020895.1-201ENST00000595362 272 ntBASIC3.56□□□□□ -1.84
CDR1P51861 AL357075.2-201ENST00000614906 189 ntBASIC3.56□□□□□ -1.84
CDR1P51861 U2.21-201ENST00000637295 81 ntBASIC3.56□□□□□ -1.84
CDR1P51861 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.56□□□□□ -1.84
CDR1P51861 MFSD8-233ENST00000641482 4860 ntBASIC3.56□□□□□ -1.84
CDR1P51861 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
CDR1P51861 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.56□□□□□ -1.84
CDR1P51861 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.56□□□□□ -1.84
CDR1P51861 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
CDR1P51861 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDR1P51861 AC110774.1-201ENST00000623567 2018 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.55□□□□□ -1.84
CDR1P51861 FTLP6-201ENST00000355274 422 ntBASIC3.55□□□□□ -1.84
CDR1P51861 RNU1-70P-201ENST00000362618 164 ntBASIC3.55□□□□□ -1.84
CDR1P51861 RNA5SP374-201ENST00000362939 125 ntBASIC3.55□□□□□ -1.84
CDR1P51861 RNU1-140P-201ENST00000365040 165 ntBASIC3.55□□□□□ -1.84
CDR1P51861 RNU6-449P-201ENST00000383914 107 ntBASIC3.55□□□□□ -1.84
CDR1P51861 Y_RNA.400-201ENST00000383963 111 ntBASIC3.55□□□□□ -1.84
CDR1P51861 Y_RNA.595-201ENST00000410403 105 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.55□□□□□ -1.84
CDR1P51861 AL512844.2-201ENST00000433990 593 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AC007969.2-201ENST00000441891 191 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.55□□□□□ -1.84
CDR1P51861 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.55□□□□□ -1.84
CDR1P51861 RNU1-103P-201ENST00000516502 125 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.55□□□□□ -1.84
CDR1P51861 AC055872.1-201ENST00000570978 278 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AL133393.1-201ENST00000603277 287 ntBASIC3.55□□□□□ -1.84
CDR1P51861 AC091895.1-201ENST00000624494 256 ntBASIC3.55□□□□□ -1.84
CDR1P51861 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.55□□□□□ -1.84
CDR1P51861 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDR1P51861 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.55□□□□□ -1.84
CDR1P51861 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.55□□□□□ -1.84
CDR1P51861 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.54□□□□□ -1.84
CDR1P51861 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.54□□□□□ -1.84
CDR1P51861 SNORD56.1-201ENST00000362913 68 ntBASIC3.54□□□□□ -1.84
CDR1P51861 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
CDR1P51861 Y_RNA.488-201ENST00000384403 102 ntBASIC3.54□□□□□ -1.84
CDR1P51861 SNORA22C-201ENST00000384614 134 ntBASIC3.54□□□□□ -1.84
CDR1P51861 MIR325-201ENST00000385260 98 ntBASIC3.54□□□□□ -1.84
CDR1P51861 RNU6-1168P-201ENST00000390831 104 ntBASIC3.54□□□□□ -1.84
CDR1P51861 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.54□□□□□ -1.84
CDR1P51861 AC244505.4-201ENST00000434905 287 ntBASIC3.54□□□□□ -1.84
CDR1P51861 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.54□□□□□ -1.84
CDR1P51861 GPM6BP3-201ENST00000442797 145 ntBASIC3.54□□□□□ -1.84
CDR1P51861 SSXP5-201ENST00000443473 287 ntBASIC3.54□□□□□ -1.84
CDR1P51861 HMGB3P3-201ENST00000510526 400 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms