Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-1082P-201ENST00000364574 107 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 RNA5SP51-201ENST00000364750 119 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 RNU6-1323P-201ENST00000384025 107 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 RNA5SP129-201ENST00000410276 118 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 RN7SKP177-201ENST00000410567 355 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 RNU6-197P-201ENST00000516680 100 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.07□□□□□ -1.6
PRIM1P49642 AC012493.2-201ENST00000595083 291 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 AC108081.1-201ENST00000604358 221 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 AL137843.1-201ENST00000605078 385 ntBASIC5.07□□□□□ -1.6
PRIM1P49642 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRIM1P49642 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.07□□□□□ -1.6
PRIM1P49642 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRIM1P49642 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRIM1P49642 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRIM1P49642 SNORA18.2-201ENST00000383865 132 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 SNORA20B-201ENST00000384220 132 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 SNORA67.2-201ENST00000384300 149 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 RNU6-880P-201ENST00000384526 107 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRIM1P49642 MIR873-201ENST00000401120 77 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 NDUFB4P4-201ENST00000404822 243 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 RNA5SP306-201ENST00000411087 107 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 AC004866.1-201ENST00000411748 78 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 Z92545.1-201ENST00000411782 234 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.06□□□□□ -1.6
PRIM1P49642 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.06□□□□□ -1.6
PRIM1P49642 RPS26P15-201ENST00000488067 348 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 RPS29P20-201ENST00000489592 171 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 AC005921.1-201ENST00000510589 286 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 HIGD1AP1-201ENST00000550979 275 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 MIR5187-201ENST00000583479 76 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 AC099778.2-201ENST00000610904 211 ntBASIC5.06□□□□□ -1.6
PRIM1P49642 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRIM1P49642 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRIM1P49642 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.06□□□□□ -1.6
PRIM1P49642 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.05□□□□□ -1.6
PRIM1P49642 Y_RNA.369-201ENST00000365568 117 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 MIR708-201ENST00000390708 88 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 RNU6-383P-201ENST00000410864 94 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.05□□□□□ -1.6
PRIM1P49642 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.05□□□□□ -1.6
PRIM1P49642 CYCSP35-201ENST00000451978 304 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 SNORA59A-201ENST00000459326 152 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 RPS29P24-201ENST00000486345 171 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 Vault.1-201ENST00000516474 102 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 RNU6-1061P-201ENST00000516530 99 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 MIR7702-201ENST00000621931 59 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.05□□□□□ -1.6
PRIM1P49642 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.05□□□□□ -1.6
PRIM1P49642 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.05□□□□□ -1.6
PRIM1P49642 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRIM1P49642 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRIM1P49642 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRIM1P49642 Y_RNA.111-201ENST00000363248 100 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 Y_RNA.346-201ENST00000365385 112 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 Y_RNA.432-201ENST00000384087 111 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 MIR586-201ENST00000385035 97 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 RN7SKP101-201ENST00000411376 320 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AC005300.1-201ENST00000428401 373 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 SNRPGP8-201ENST00000454064 226 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AC117454.1-201ENST00000491120 168 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AC025554.1-201ENST00000505641 188 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 SNORD33.1-201ENST00000516213 88 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AC022695.1-201ENST00000522089 237 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AC131055.1-201ENST00000584626 316 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 AL121890.5-201ENST00000620848 304 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRIM1P49642 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRIM1P49642 USP8P1-201ENST00000494673 3183 ntBASIC5.04□□□□□ -1.6
PRIM1P49642 RNU4-15P-201ENST00000362613 141 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 Y_RNA.622-201ENST00000411091 108 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 RPL39P40-201ENST00000445481 146 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 BX510359.1-201ENST00000456973 237 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 AC145146.1-201ENST00000496370 254 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.03□□□□□ -1.6
PRIM1P49642 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.03□□□□□ -1.6
PRIM1P49642 RN7SKP18-201ENST00000516005 275 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.03□□□□□ -1.6
PRIM1P49642 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.03□□□□□ -1.6
PRIM1P49642 AC005000.2-201ENST00000605468 310 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 AC004832.5-201ENST00000608677 401 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 AL591926.4-201ENST00000616895 298 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 MIR4727-201ENST00000622232 55 ntBASIC5.03□□□□□ -1.6
PRIM1P49642 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRIM1P49642 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
PRIM1P49642 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PRIM1P49642 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRIM1P49642 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PRIM1P49642 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PRIM1P49642 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRIM1P49642 AC018555.1-201ENST00000567548 1980 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRIM1P49642 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PRIM1P49642 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRIM1P49642 RNU6-600P-201ENST00000362524 99 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 Y_RNA.114-201ENST00000363265 113 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 RNU6-674P-201ENST00000363831 107 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 MIR490-201ENST00000384865 128 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms