Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL513185.2-201ENST00000425543 193 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 MRPS10P2-201ENST00000431226 381 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AC007677.1-201ENST00000445757 515 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.32□□□□□ -2.2
CX3CR1P49238 MTCO2P7-201ENST00000446518 666 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AMD1P1-201ENST00000457220 922 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 Y_RNA.654-201ENST00000497848 106 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 HMGN1P13-201ENST00000505795 138 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-612P-201ENST00000516909 102 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
CX3CR1P49238 AC024909.2-201ENST00000553035 286 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AL512360.1-201ENST00000555346 234 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 MIR3683-201ENST00000580847 82 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AL356157.2-201ENST00000605122 111 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 CTHRC1P1-201ENST00000605383 469 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-89P-201ENST00000606519 100 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AL357078.3-201ENST00000607528 618 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 AC093783.1-201ENST00000612976 329 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CX3CR1P49238 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CX3CR1P49238 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.31□□□□□ -2.2
CX3CR1P49238 AC092268.1-201ENST00000342691 405 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 Y_RNA.38-201ENST00000362617 102 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNU6-271P-201ENST00000363858 105 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNU6-1090P-201ENST00000364065 94 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNA5SP190-201ENST00000365222 118 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 SNORA32.2-201ENST00000384049 122 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 MIR517C-201ENST00000385103 95 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.31□□□□□ -2.2
CX3CR1P49238 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.31□□□□□ -2.2
CX3CR1P49238 MTND3P9-201ENST00000429526 346 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
CX3CR1P49238 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNU7-14P-201ENST00000459331 62 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AC025465.4-201ENST00000513422 638 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 Y_RNA.665-201ENST00000516177 98 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 RNU6-1098P-201ENST00000516772 96 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 SUMO2P18-201ENST00000518873 252 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.31□□□□□ -2.2
CX3CR1P49238 MRPS36P4-201ENST00000534436 298 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.31□□□□□ -2.2
CX3CR1P49238 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.31□□□□□ -2.2
CX3CR1P49238 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 MIR3941-201ENST00000582572 103 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 AC010525.2-201ENST00000590920 195 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CX3CR1P49238 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.31□□□□□ -2.2
CX3CR1P49238 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CX3CR1P49238 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CX3CR1P49238 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CX3CR1P49238 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CX3CR1P49238 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CX3CR1P49238 Y_RNA.231-201ENST00000364358 102 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 RNU6-1042P-201ENST00000384204 107 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 Y_RNA.517-201ENST00000384551 106 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 MIR549A-201ENST00000385268 96 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CX3CR1P49238 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 Y_RNA.615-201ENST00000410769 117 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 MTCO1P20-201ENST00000425366 358 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.3□□□□□ -2.2
CX3CR1P49238 USP9YP28-201ENST00000435142 589 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.3□□□□□ -2.2
CX3CR1P49238 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.3□□□□□ -2.2
CX3CR1P49238 snoU13.26-201ENST00000459452 105 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AC016632.1-201ENST00000503994 196 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.3□□□□□ -2.2
CX3CR1P49238 SNORA19.2-201ENST00000516013 114 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 RNU5F-4P-201ENST00000516581 114 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 EIF4A1P12-201ENST00000551910 141 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AL157687.1-201ENST00000554853 619 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AC009994.1-201ENST00000606889 253 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.3□□□□□ -2.2
CX3CR1P49238 AC068137.3-201ENST00000639191 341 ntBASIC1.3□□□□□ -2.2
CX3CR1P49238 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CX3CR1P49238 OR4G1P-203ENST00000641984 1631 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
CX3CR1P49238 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CX3CR1P49238 RNU6-451P-201ENST00000362921 107 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 RNU1-42P-201ENST00000364033 160 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 Y_RNA.318-201ENST00000365131 97 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 SNORA29-201ENST00000384183 140 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 MIR487A-201ENST00000385009 80 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 SNORA67.6-201ENST00000391093 99 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CX3CR1P49238 MIR450B-201ENST00000401182 78 ntBASIC1.29□□□□□ -2.2
CX3CR1P49238 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.29□□□□□ -2.2
CX3CR1P49238 UBE2V1P8-201ENST00000437166 265 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms