Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 MIR6863-201ENST00000636112 90 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 AL450472.1-202ENST00000637286 180 ntBASIC1.32□□□□□ -2.2
CXCL12P48061 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
CXCL12P48061 RNU1-58P-201ENST00000362413 163 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 RNU4-20P-201ENST00000365601 151 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 Y_RNA.378-201ENST00000365652 113 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 RNU6-1042P-201ENST00000384204 107 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 RNA5SP465-201ENST00000391195 109 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL12P48061 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.31□□□□□ -2.2
CXCL12P48061 MTND2P22-201ENST00000444325 1033 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 MTND1P29-201ENST00000448112 647 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 RNU7-138P-201ENST00000459479 64 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AC083798.1-201ENST00000472671 131 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 RNU6-189P-201ENST00000516120 101 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 CENPUP1-201ENST00000526649 1202 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL12P48061 AP003033.1-201ENST00000527244 415 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.31□□□□□ -2.2
CXCL12P48061 AC109446.1-201ENST00000566172 220 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AC092747.3-201ENST00000603769 301 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AP000654.2-201ENST00000605633 586 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 AC245008.1-201ENST00000608123 476 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 SNORA43.4-201ENST00000629559 138 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
CXCL12P48061 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CXCL12P48061 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.3□□□□□ -2.2
CXCL12P48061 Y_RNA.99-201ENST00000363138 105 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 SNORD114-6-201ENST00000364393 72 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 RNU4-66P-201ENST00000365199 138 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 RNU6-26P-201ENST00000383985 107 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 SNORA26.3-201ENST00000391119 136 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 CALM2P3-201ENST00000400429 449 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 RNA5SP201-201ENST00000410316 124 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 RNA5SP501-201ENST00000410990 112 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 MTND2P29-201ENST00000438595 412 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 MTCO2P3-201ENST00000442543 421 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 RNU6-261P-201ENST00000459506 102 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 RPS29P1-201ENST00000465274 159 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC016632.1-201ENST00000503994 196 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.3□□□□□ -2.2
CXCL12P48061 RNU6-835P-201ENST00000516974 104 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AP005597.4-201ENST00000526762 229 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
CXCL12P48061 MIR3923-201ENST00000579521 83 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 AL356157.2-201ENST00000605122 111 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AL022345.1-201ENST00000607292 135 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC064836.2-201ENST00000609491 462 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AL121757.2-201ENST00000611223 313 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 AC103705.1-201ENST00000619013 241 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL12P48061 OR5AK4P-201ENST00000635912 903 ntBASIC1.3□□□□□ -2.2
CXCL12P48061 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL12P48061 AC092268.1-201ENST00000342691 405 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 SNORD114-26-201ENST00000363543 72 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 RNU6-1322P-201ENST00000364309 107 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 RNU4-56P-201ENST00000364700 142 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 Y_RNA.354-201ENST00000365448 111 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 RNU6-378P-201ENST00000384324 107 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 MTCO3P40-201ENST00000392516 676 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CXCL12P48061 MTND4LP16-201ENST00000440828 295 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL12P48061 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL12P48061 SRRM1P2-201ENST00000464531 1192 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL12P48061 RNU6-1069P-201ENST00000516612 133 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 RNU6-1223P-201ENST00000517124 104 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 RNU6-323P-201ENST00000521915 107 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 AC104576.1-201ENST00000524225 88 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 AC025423.5-201ENST00000550230 219 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 NBR2-204ENST00000587322 63 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 PCGEM1.1-201ENST00000613431 131 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.29□□□□□ -2.2
CXCL12P48061 AC124864.2-201ENST00000624736 186 ntBASIC1.29□□□□□ -2.2
CXCL12P48061 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CXCL12P48061 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CXCL12P48061 RNU6-1085P-201ENST00000363576 107 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 RNU6-82P-201ENST00000363970 107 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 RNA5SP493-201ENST00000364115 91 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CXCL12P48061 RNU6-780P-201ENST00000391030 104 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 MIR934-201ENST00000401241 83 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 AL357139.1-201ENST00000407792 426 ntBASIC1.28□□□□□ -2.2
CXCL12P48061 RN7SKP51-201ENST00000410781 304 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms