Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 Y_RNA.339-201ENST00000365325 102 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNU6-767P-201ENST00000384132 107 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNY3P14-201ENST00000384309 102 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 Y_RNA.473-201ENST00000384333 102 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
BRCC3P46736 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNU2-48P-201ENST00000410694 191 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RPL21P111-201ENST00000418453 477 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCC3P46736 AL133396.1-201ENST00000432048 687 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RPS15AP10-201ENST00000432472 382 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AC244670.1-201ENST00000436879 112 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.91□□□□□ -2.1
BRCC3P46736 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.91□□□□□ -2.1
BRCC3P46736 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCC3P46736 PPP1R2P5-201ENST00000457256 603 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 MTCO1P29-201ENST00000496868 288 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 PRDX4P1-201ENST00000507189 574 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 RNU6-250P-201ENST00000516958 103 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCC3P46736 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.91□□□□□ -2.1
BRCC3P46736 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCC3P46736 ANP32BP3-201ENST00000559213 706 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCC3P46736 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 AL356157.2-201ENST00000605122 111 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.91□□□□□ -2.1
BRCC3P46736 AC090517.3-201ENST00000625170 141 ntBASIC1.91□□□□□ -2.1
BRCC3P46736 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
BRCC3P46736 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
BRCC3P46736 KPNA2P1-201ENST00000458289 1591 ntBASIC1.9□□□□□ -2.1
BRCC3P46736 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 RNU6-227P-201ENST00000362865 103 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 Y_RNA.72-201ENST00000362894 103 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 RNU6-1059P-201ENST00000363752 98 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 Y_RNA.504-201ENST00000384481 104 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
BRCC3P46736 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 RNU6-510P-201ENST00000391239 108 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 RNA5SP270-201ENST00000411361 118 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 Z82205.1-201ENST00000428456 297 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCC3P46736 RPL31P58-201ENST00000469001 379 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCC3P46736 MTND5P5-201ENST00000503764 376 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AC022447.4-201ENST00000504053 364 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AC233702.2-202ENST00000562547 291 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCC3P46736 SNRPGP17-201ENST00000603780 214 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AL670379.2-201ENST00000604983 252 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AC022306.2-201ENST00000617563 647 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 SNORD98-201ENST00000636377 67 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
BRCC3P46736 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
BRCC3P46736 AC131280.1-202ENST00000624067 4211 ntBASIC1.9□□□□□ -2.11
BRCC3P46736 AP000560.1-201ENST00000624150 1937 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 SNORD50.1-201ENST00000362987 71 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 Y_RNA.123-201ENST00000363338 102 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 SNORD81.2-201ENST00000365153 76 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 MIR521-1-201ENST00000384902 87 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 MIR517A-201ENST00000385001 87 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 SNORA12-201ENST00000391162 147 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 MIR548K-201ENST00000408406 116 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 MIR548F5-201ENST00000408421 86 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 RNU4-14P-201ENST00000410858 122 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AL590135.1-201ENST00000422215 156 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AL358453.1-201ENST00000422522 250 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AC019205.3-201ENST00000424573 156 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 MTND4LP16-201ENST00000440828 295 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCC3P46736 AC016700.2-201ENST00000446011 156 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.89□□□□□ -2.11
BRCC3P46736 AC015911.1-201ENST00000495111 156 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AC103851.1-201ENST00000506833 274 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCC3P46736 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCC3P46736 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.89□□□□□ -2.11
BRCC3P46736 RBM11P1-201ENST00000604951 799 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AC018889.1-201ENST00000605372 397 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
BRCC3P46736 AC009541.1-201ENST00000438279 2662 ntBASIC1.89□□□□□ -2.11
BRCC3P46736 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
BRCC3P46736 Y_RNA.88-201ENST00000363029 99 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 SNORA26.3-201ENST00000391119 136 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 HMGN2P39-201ENST00000398005 273 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 USP9YP30-201ENST00000430729 455 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.88□□□□□ -2.11
BRCC3P46736 PCMTD1P1-201ENST00000455560 355 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 MTND4P17-201ENST00000470444 350 ntBASIC1.88□□□□□ -2.11
BRCC3P46736 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms