Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
SLC1A1P43005 MIR3976-201ENST00000606807 139 ntBASIC1.22□□□□□ -2.21
SLC1A1P43005 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
SLC1A1P43005 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.22□□□□□ -2.21
SLC1A1P43005 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
SLC1A1P43005 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
SLC1A1P43005 AC009541.1-201ENST00000438279 2662 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
SLC1A1P43005 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC1A1P43005 RNU6-545P-201ENST00000362681 104 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 Y_RNA.159-201ENST00000363674 87 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 RNU6-1019P-201ENST00000364424 107 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 SNORA18.2-201ENST00000383865 132 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.21□□□□□ -2.22
SLC1A1P43005 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.21□□□□□ -2.22
SLC1A1P43005 MTND2P9-201ENST00000422293 931 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 snoU13.6-201ENST00000458785 104 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 RNU6-856P-201ENST00000516959 98 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
SLC1A1P43005 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.21□□□□□ -2.22
SLC1A1P43005 AC090115.3-201ENST00000553218 849 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
SLC1A1P43005 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.2□□□□□ -2.22
SLC1A1P43005 SNORA63D-201ENST00000364359 132 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 Y_RNA.255-201ENST00000364581 97 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 RNU6-418P-201ENST00000384035 107 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AC090960.1-201ENST00000421072 306 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.2□□□□□ -2.22
SLC1A1P43005 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 RNU7-63P-201ENST00000459054 62 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 RNU7-180P-201ENST00000459240 63 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
SLC1A1P43005 RNA5SP481-201ENST00000516814 122 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 DEFB131C-201ENST00000528817 165 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.2□□□□□ -2.22
SLC1A1P43005 AC109347.2-201ENST00000610220 349 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
SLC1A1P43005 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC1A1P43005 RNU6-1106P-201ENST00000390845 107 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AL117342.1-201ENST00000404861 406 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 MTCO3P29-201ENST00000432119 779 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.19□□□□□ -2.22
SLC1A1P43005 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.19□□□□□ -2.22
SLC1A1P43005 OR2AQ1P-201ENST00000451972 200 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 RNU7-138P-201ENST00000459479 64 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC010486.2-201ENST00000505572 483 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 MTCO2P4-201ENST00000517968 247 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.19□□□□□ -2.22
SLC1A1P43005 LRRC34P1-201ENST00000542742 915 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 uc_338.34-201ENST00000617467 174 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC008147.4-201ENST00000617570 1204 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 AC023510.2-201ENST00000622162 746 ntBASIC1.19□□□□□ -2.22
SLC1A1P43005 RNU6-562P-201ENST00000362731 107 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 RNU6-996P-201ENST00000365438 107 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 RNA5SP219-201ENST00000390940 113 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 FGF7P8-201ENST00000402994 292 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 RN7SKP142-201ENST00000411236 328 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 BTF3P4-201ENST00000418852 495 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC1A1P43005 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC1A1P43005 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC1A1P43005 CCDC34P1-201ENST00000507441 517 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 AC067942.3-201ENST00000512025 362 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SLC1A1P43005 RNA5SP384-201ENST00000516615 116 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 RNU6-612P-201ENST00000516909 102 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC1A1P43005 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC1A1P43005 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.18□□□□□ -2.22
SLC1A1P43005 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.18□□□□□ -2.22
SLC1A1P43005 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.18□□□□□ -2.22
SLC1A1P43005 AC005668.1-201ENST00000571142 476 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 HULC.1-201ENST00000612720 240 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
SLC1A1P43005 RNA5SP432-201ENST00000362480 116 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 MIR300-201ENST00000401138 83 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
SLC1A1P43005 AC073415.1-201ENST00000449240 153 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 AC011406.1-201ENST00000512440 370 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 RNU6-323P-201ENST00000521915 107 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 MTND4P7-201ENST00000523876 130 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.17□□□□□ -2.22
SLC1A1P43005 AC005609.4-201ENST00000625071 447 ntBASIC1.17□□□□□ -2.22
SLC1A1P43005 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.17□□□□□ -2.22
SLC1A1P43005 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms