Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.31□□□□□ -2.2
TNFSF9P41273 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.31□□□□□ -2.2
TNFSF9P41273 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.31□□□□□ -2.2
TNFSF9P41273 AC139712.2-201ENST00000424302 339 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.31□□□□□ -2.2
TNFSF9P41273 AC002486.1-201ENST00000435098 391 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
TNFSF9P41273 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC098826.2-201ENST00000452011 651 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 RPS3AP17-201ENST00000472594 777 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC093852.1-201ENST00000503587 266 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.31□□□□□ -2.2
TNFSF9P41273 PIGPP4-201ENST00000584447 307 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC012507.3-201ENST00000603556 477 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC092954.2-201ENST00000609103 430 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 HULC.1-201ENST00000612720 240 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC022418.1-201ENST00000624118 445 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 AC022513.1-201ENST00000624512 117 ntBASIC1.31□□□□□ -2.2
TNFSF9P41273 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
TNFSF9P41273 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU6-1120P-201ENST00000362988 108 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU6-996P-201ENST00000365438 107 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 Y_RNA.378-201ENST00000365652 113 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU4-55P-201ENST00000410731 137 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFSF9P41273 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
TNFSF9P41273 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TNFSF9P41273 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFSF9P41273 AC073464.1-201ENST00000429823 534 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.3□□□□□ -2.2
TNFSF9P41273 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.3□□□□□ -2.2
TNFSF9P41273 RPL31P3-201ENST00000458430 332 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU1-131P-201ENST00000458943 161 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU6-261P-201ENST00000459506 102 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC087477.1-201ENST00000465747 340 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 GMFBP1-201ENST00000467831 427 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 ATP5EP1-201ENST00000510257 156 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 Y_RNA.704-201ENST00000516851 102 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.3□□□□□ -2.2
TNFSF9P41273 HMGB1P33-201ENST00000563485 527 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.3□□□□□ -2.2
TNFSF9P41273 MIR3923-201ENST00000579521 83 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 BNIP3P16-201ENST00000589779 534 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC080078.3-201ENST00000605407 463 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 AC093783.1-201ENST00000612976 329 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 MTND4P14-201ENST00000435799 1354 ntBASIC1.3□□□□□ -2.2
TNFSF9P41273 Y_RNA.296-201ENST00000364930 108 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 Y_RNA.372-201ENST00000365599 102 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 Y_RNA.582-201ENST00000391023 95 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 RNU4-46P-201ENST00000410818 138 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AL117339.3-201ENST00000418733 162 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 MTCO3P46-201ENST00000425787 232 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AL121601.2-201ENST00000438019 707 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AL031274.1-201ENST00000450334 232 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AL356010.1-201ENST00000456364 102 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 RNU7-63P-201ENST00000459054 62 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 RNA5SP401-201ENST00000515920 127 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 RN7SKP298-201ENST00000515950 94 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 RNU6-405P-201ENST00000516637 110 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 SUMO2P18-201ENST00000518873 252 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AP005597.4-201ENST00000526762 229 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AC090115.3-201ENST00000553218 849 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 MTCO3P23-201ENST00000561363 289 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.29□□□□□ -2.2
TNFSF9P41273 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AC087683.1-201ENST00000591187 441 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AC091805.2-201ENST00000603848 235 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AF250324.2-201ENST00000608299 610 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
TNFSF9P41273 MIR6863-201ENST00000636112 90 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 AL450472.1-202ENST00000637286 180 ntBASIC1.29□□□□□ -2.2
TNFSF9P41273 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TNFSF9P41273 RNU1-22P-201ENST00000363334 158 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 SNORD32A-201ENST00000364805 84 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 RNU6-259P-201ENST00000383999 107 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 RNU6-38P-201ENST00000384085 107 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 MTCYBP2-201ENST00000407745 171 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC013470.1-201ENST00000453438 462 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 SNRPFP3-201ENST00000457792 225 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AL163973.1-201ENST00000484753 577 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC079382.1-201ENST00000493346 557 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 SNORA40.12-201ENST00000516329 111 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 RNU6-835P-201ENST00000516974 104 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AC104383.1-201ENST00000530297 370 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AL137161.1-201ENST00000532231 390 ntBASIC1.28□□□□□ -2.2
TNFSF9P41273 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.28□□□□□ -2.2
TNFSF9P41273 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms