Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.24□□□□□ -2.05
HADHAP40939 7SK.7-201ENST00000603504 247 ntBASIC2.24□□□□□ -2.05
HADHAP40939 RMST_6.1-201ENST00000611980 203 ntBASIC2.24□□□□□ -2.05
HADHAP40939 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
HADHAP40939 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.24□□□□□ -2.05
HADHAP40939 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
HADHAP40939 MTND5P9-201ENST00000503854 1755 ntBASIC2.23□□□□□ -2.05
HADHAP40939 RN7SKP32-201ENST00000410167 303 ntBASIC2.23□□□□□ -2.05
HADHAP40939 RNU2-41P-201ENST00000410991 178 ntBASIC2.23□□□□□ -2.05
HADHAP40939 DPH3P2-201ENST00000422618 250 ntBASIC2.23□□□□□ -2.05
HADHAP40939 AL139415.2-201ENST00000431968 163 ntBASIC2.23□□□□□ -2.05
HADHAP40939 MTND2P29-201ENST00000438595 412 ntBASIC2.23□□□□□ -2.05
HADHAP40939 PPP1R2P5-201ENST00000457256 603 ntBASIC2.23□□□□□ -2.05
HADHAP40939 AC087477.1-201ENST00000465747 340 ntBASIC2.23□□□□□ -2.05
HADHAP40939 RPL23AP75-201ENST00000491601 451 ntBASIC2.23□□□□□ -2.05
HADHAP40939 AF186996.7-201ENST00000492781 209 ntBASIC2.23□□□□□ -2.05
HADHAP40939 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
HADHAP40939 SNRPGP18-201ENST00000553000 214 ntBASIC2.23□□□□□ -2.05
HADHAP40939 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
HADHAP40939 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
HADHAP40939 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
HADHAP40939 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
HADHAP40939 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
HADHAP40939 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.23□□□□□ -2.05
HADHAP40939 CASC19-280ENST00000642102 1351 ntBASIC2.23□□□□□ -2.05
HADHAP40939 CBX3P1-201ENST00000325243 554 ntBASIC2.22□□□□□ -2.05
HADHAP40939 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HADHAP40939 RNU1-58P-201ENST00000362413 163 ntBASIC2.22□□□□□ -2.05
HADHAP40939 RNU6-137P-201ENST00000363680 108 ntBASIC2.22□□□□□ -2.05
HADHAP40939 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
HADHAP40939 RNU6-438P-201ENST00000365561 103 ntBASIC2.22□□□□□ -2.05
HADHAP40939 RNU6-767P-201ENST00000384132 107 ntBASIC2.22□□□□□ -2.05
HADHAP40939 Y_RNA.490-201ENST00000384413 102 ntBASIC2.22□□□□□ -2.05
HADHAP40939 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
HADHAP40939 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HADHAP40939 AC123900.1-201ENST00000420390 96 ntBASIC2.22□□□□□ -2.05
HADHAP40939 AL358453.1-201ENST00000422522 250 ntBASIC2.22□□□□□ -2.05
HADHAP40939 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.22□□□□□ -2.05
HADHAP40939 snoU13.6-201ENST00000458785 104 ntBASIC2.22□□□□□ -2.05
HADHAP40939 AC116337.1-201ENST00000509680 687 ntBASIC2.22□□□□□ -2.05
HADHAP40939 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
HADHAP40939 RNU6-991P-201ENST00000516168 107 ntBASIC2.22□□□□□ -2.05
HADHAP40939 RNA5SP54-201ENST00000516951 92 ntBASIC2.22□□□□□ -2.05
HADHAP40939 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.22□□□□□ -2.05
HADHAP40939 AC026464.5-201ENST00000562497 722 ntBASIC2.22□□□□□ -2.05
HADHAP40939 SNRPGP20-201ENST00000604477 205 ntBASIC2.22□□□□□ -2.05
HADHAP40939 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.22□□□□□ -2.05
HADHAP40939 AC005562.2-201ENST00000618264 111 ntBASIC2.22□□□□□ -2.05
HADHAP40939 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HADHAP40939 Y_RNA.166-201ENST00000363730 102 ntBASIC2.21□□□□□ -2.06
HADHAP40939 Y_RNA.279-201ENST00000364763 95 ntBASIC2.21□□□□□ -2.06
HADHAP40939 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
HADHAP40939 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AC074085.1-201ENST00000413598 418 ntBASIC2.21□□□□□ -2.06
HADHAP40939 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HADHAP40939 NCOR1P3-201ENST00000420479 303 ntBASIC2.21□□□□□ -2.06
HADHAP40939 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
HADHAP40939 Z82205.1-201ENST00000428456 297 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AL035666.1-201ENST00000446195 348 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.21□□□□□ -2.06
HADHAP40939 SNORD5.1-201ENST00000458800 75 ntBASIC2.21□□□□□ -2.06
HADHAP40939 RNU1-131P-201ENST00000458943 161 ntBASIC2.21□□□□□ -2.06
HADHAP40939 UBL5P3-201ENST00000475112 231 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.21□□□□□ -2.06
HADHAP40939 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
HADHAP40939 MTND5P5-201ENST00000503764 376 ntBASIC2.21□□□□□ -2.06
HADHAP40939 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.21□□□□□ -2.06
HADHAP40939 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.21□□□□□ -2.06
HADHAP40939 MIR5696-201ENST00000578474 85 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.21□□□□□ -2.06
HADHAP40939 TCL6_2.1-201ENST00000615162 119 ntBASIC2.21□□□□□ -2.06
HADHAP40939 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
HADHAP40939 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.21□□□□□ -2.06
HADHAP40939 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.2□□□□□ -2.06
HADHAP40939 SNORD115-8-201ENST00000363856 82 ntBASIC2.2□□□□□ -2.06
HADHAP40939 RNU6-1164P-201ENST00000364428 107 ntBASIC2.2□□□□□ -2.06
HADHAP40939 SNORD115-38-201ENST00000365037 82 ntBASIC2.2□□□□□ -2.06
HADHAP40939 RNU6-1026P-201ENST00000384465 108 ntBASIC2.2□□□□□ -2.06
HADHAP40939 RNU6-174P-201ENST00000410406 106 ntBASIC2.2□□□□□ -2.06
HADHAP40939 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.2□□□□□ -2.06
HADHAP40939 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
HADHAP40939 PRDX4P1-201ENST00000507189 574 ntBASIC2.2□□□□□ -2.06
HADHAP40939 Y_RNA.682-201ENST00000516457 100 ntBASIC2.2□□□□□ -2.06
HADHAP40939 AC005668.1-201ENST00000571142 476 ntBASIC2.2□□□□□ -2.06
HADHAP40939 MIR4273-201ENST00000582824 84 ntBASIC2.2□□□□□ -2.06
HADHAP40939 AL096840.1-201ENST00000603287 93 ntBASIC2.2□□□□□ -2.06
HADHAP40939 AC130454.1-201ENST00000622948 401 ntBASIC2.2□□□□□ -2.06
HADHAP40939 BX322639.1-202ENST00000423987 2213 ntBASIC2.19□□□□□ -2.06
HADHAP40939 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HADHAP40939 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HADHAP40939 Y_RNA.160-201ENST00000363677 92 ntBASIC2.19□□□□□ -2.06
HADHAP40939 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
HADHAP40939 MIR548K-201ENST00000408406 116 ntBASIC2.19□□□□□ -2.06
HADHAP40939 RNA5SP450-201ENST00000411206 102 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC107399.1-201ENST00000451226 265 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC007395.1-201ENST00000451333 677 ntBASIC2.19□□□□□ -2.06
HADHAP40939 AC016925.1-201ENST00000458303 298 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms