Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RNU6-1064P-201ENST00000410626 104 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 AL358075.3-201ENST00000426289 226 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 RPL23AP95-201ENST00000426806 265 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA10P31260 AC025750.2-201ENST00000442609 450 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA10P31260 Y_RNA.637-201ENST00000459424 114 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA10P31260 RN7SKP164-201ENST00000516138 266 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 RNA5SP290-201ENST00000517133 127 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 CYCSP23-201ENST00000519781 313 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA10P31260 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA10P31260 MIR3613-201ENST00000579844 87 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 MIR3145-201ENST00000580727 82 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 SNORD84-203ENST00000584275 78 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 uc_338.1-201ENST00000612113 180 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 MIR7106-201ENST00000612419 65 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.99□□□□□ -1.77
HOXA10P31260 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA10P31260 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HOXA10P31260 RNU6-527P-201ENST00000363425 104 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 RNU6-103P-201ENST00000363686 107 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 Y_RNA.172-201ENST00000363765 102 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 SNORA72.2-201ENST00000365028 127 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 RNU6-356P-201ENST00000384140 107 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 SNORA54-201ENST00000384281 123 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 RNU6-429P-201ENST00000384582 108 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 RNU6-578P-201ENST00000390980 103 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA10P31260 AC098614.2-201ENST00000426040 255 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA10P31260 AC243964.1-201ENST00000441814 261 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA10P31260 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA10P31260 RPL23AP67-201ENST00000465341 474 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA10P31260 SNORA43.2-201ENST00000516652 128 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXA10P31260 MIR4744-201ENST00000581563 82 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 UBL5P2-201ENST00000583788 219 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 MIR622-201ENST00000638396 96 ntBASIC3.98□□□□□ -1.77
HOXA10P31260 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA10P31260 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA10P31260 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA10P31260 AL391516.1-201ENST00000554380 2449 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA10P31260 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 Y_RNA.101-201ENST00000363154 102 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 SNORD32A-201ENST00000364805 84 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 RN7SKP220-201ENST00000410611 288 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 RNU6-1199P-201ENST00000411249 104 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 AC126124.2-201ENST00000413542 321 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 AC006026.2-201ENST00000457376 180 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 RNU7-197P-201ENST00000458836 62 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA10P31260 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA10P31260 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA10P31260 AC091874.1-201ENST00000511402 339 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 MIR5571-201ENST00000577998 113 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 AC006023.1-201ENST00000603944 259 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 SNORA43.4-201ENST00000629559 138 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 AL137790.1-201ENST00000634283 177 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 MIR3658-201ENST00000636291 56 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA10P31260 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA10P31260 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.97□□□□□ -1.77
HOXA10P31260 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HOXA10P31260 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HOXA10P31260 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.96□□□□□ -1.77
HOXA10P31260 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA10P31260 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA10P31260 Y_RNA.309-201ENST00000365046 111 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 RNA5SP31-201ENST00000411144 127 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA10P31260 AC010095.1-201ENST00000443543 144 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AL121594.1-201ENST00000475906 575 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AC078918.1-201ENST00000498515 228 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 RN7SKP179-201ENST00000516126 217 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 Y_RNA.709-201ENST00000516952 92 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AC115990.1-201ENST00000526957 301 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA10P31260 AC009127.3-201ENST00000570531 403 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA10P31260 RPL12P50-201ENST00000603116 116 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AC010999.1-201ENST00000611856 324 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 AL078604.3-201ENST00000615580 211 ntBASIC3.96□□□□□ -1.78
HOXA10P31260 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA10P31260 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HOXA10P31260 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA10P31260 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
HOXA10P31260 RNU6-199P-201ENST00000362954 107 ntBASIC3.95□□□□□ -1.78
HOXA10P31260 RNU5F-3P-201ENST00000363767 117 ntBASIC3.95□□□□□ -1.78
HOXA10P31260 RNU6-173P-201ENST00000364215 104 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms