Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC009878.1-201ENST00000621819 340 ntBASIC0.61□□□□□ -2.31
CD40LGP29965 snoU2-30.2-201ENST00000362805 70 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNU6-501P-201ENST00000364072 100 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNY1P12-201ENST00000364251 105 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNU6-169P-201ENST00000365336 107 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNU6-17P-201ENST00000384245 107 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNU6-18P-201ENST00000384527 107 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RPL21P1-201ENST00000399532 476 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AL117339.3-201ENST00000418733 162 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC073614.1-201ENST00000438690 650 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.6□□□□□ -2.31
CD40LGP29965 AC008628.2-201ENST00000502605 298 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 MTCO3P7-201ENST00000510008 774 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 FABP5P5-201ENST00000515537 406 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNU6-322P-201ENST00000516010 103 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.6□□□□□ -2.31
CD40LGP29965 AC024995.1-201ENST00000523014 93 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 DEFB131C-201ENST00000528817 165 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC103996.1-201ENST00000555468 102 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
CD40LGP29965 PCMTD1P2-201ENST00000565017 355 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC005771.1-201ENST00000585581 349 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC068790.6-201ENST00000602558 258 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AL078603.1-201ENST00000603824 313 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 Z99289.3-201ENST00000605586 594 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC027807.2-201ENST00000616099 408 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AL136221.1-201ENST00000621449 509 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 AC011155.2-201ENST00000623202 216 ntBASIC0.6□□□□□ -2.31
CD40LGP29965 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 SNORA20.2-201ENST00000383922 131 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 RNA5SP109-201ENST00000391010 116 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 RNU2-8P-201ENST00000410727 190 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 AC010154.1-201ENST00000425857 269 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 AC016717.1-201ENST00000448918 286 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 RAP1BP2-201ENST00000478270 544 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 Y_RNA.672-201ENST00000516289 104 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.59□□□□□ -2.31
CD40LGP29965 AC133485.1-201ENST00000567176 124 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 MIR3973-201ENST00000579824 107 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.59□□□□□ -2.31
CD40LGP29965 AC016727.2-201ENST00000603988 621 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.59□□□□□ -2.31
CD40LGP29965 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.59□□□□□ -2.31
CD40LGP29965 AC138649.3-201ENST00000622154 254 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 SNORA43.4-201ENST00000629559 138 ntBASIC0.59□□□□□ -2.31
CD40LGP29965 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CD40LGP29965 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-562P-201ENST00000362731 107 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-1287P-201ENST00000362914 107 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-1060P-201ENST00000384664 107 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-1031P-201ENST00000384773 107 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
CD40LGP29965 MIR1283-1-201ENST00000408494 87 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.58□□□□□ -2.32
CD40LGP29965 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
CD40LGP29965 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.58□□□□□ -2.32
CD40LGP29965 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.58□□□□□ -2.32
CD40LGP29965 HMGN2P34-201ENST00000437647 269 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 MTCO3P18-201ENST00000440206 761 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.58□□□□□ -2.32
CD40LGP29965 AL031274.1-201ENST00000450334 232 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC092991.1-201ENST00000477176 376 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AK3P2-201ENST00000507976 429 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 LRRC34P2-201ENST00000514850 553 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 RNU6-1146P-201ENST00000516282 102 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.58□□□□□ -2.32
CD40LGP29965 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 MIR5695-201ENST00000579717 85 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC091805.2-201ENST00000603848 235 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.58□□□□□ -2.32
CD40LGP29965 AL078595.3-201ENST00000623815 1166 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.58□□□□□ -2.32
CD40LGP29965 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.58□□□□□ -2.32
CD40LGP29965 U6.114-201ENST00000636407 96 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 AC099654.13-201ENST00000639774 207 ntBASIC0.58□□□□□ -2.32
CD40LGP29965 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CD40LGP29965 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CD40LGP29965 MTND5P17-201ENST00000418405 1603 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 Y_RNA.224-201ENST00000364308 111 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 SNORD114-22-201ENST00000365423 72 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-827P-201ENST00000365553 106 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-1235P-201ENST00000384559 107 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-1093P-201ENST00000391194 107 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AC012306.1-201ENST00000423267 114 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AC104850.1-201ENST00000435940 476 ntBASIC0.57□□□□□ -2.32
CD40LGP29965 AL512286.1-201ENST00000439244 400 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms