Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU6-762P-201ENST00000517107 102 ntBASIC4.3□□□□□ -1.72
VARSP26640 AC018630.3-201ENST00000542637 96 ntBASIC4.3□□□□□ -1.72
VARSP26640 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.3□□□□□ -1.72
VARSP26640 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
VARSP26640 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.3□□□□□ -1.72
VARSP26640 RNU6-91P-201ENST00000607774 107 ntBASIC4.3□□□□□ -1.72
VARSP26640 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
VARSP26640 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.3□□□□□ -1.72
VARSP26640 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VARSP26640 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VARSP26640 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VARSP26640 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VARSP26640 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 AC069528.2-201ENST00000624849 1991 ntBASIC4.29□□□□□ -1.72
VARSP26640 AL159152.1-201ENST00000635019 2587 ntBASIC4.29□□□□□ -1.72
VARSP26640 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 RNA5SP307-201ENST00000362863 116 ntBASIC4.29□□□□□ -1.72
VARSP26640 RNA5SP479-201ENST00000364858 117 ntBASIC4.29□□□□□ -1.72
VARSP26640 RNU6-756P-201ENST00000383997 107 ntBASIC4.29□□□□□ -1.72
VARSP26640 MIR1263-201ENST00000408324 86 ntBASIC4.29□□□□□ -1.72
VARSP26640 MIR1183-201ENST00000408856 89 ntBASIC4.29□□□□□ -1.72
VARSP26640 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
VARSP26640 AL356387.2-201ENST00000422272 243 ntBASIC4.29□□□□□ -1.72
VARSP26640 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
VARSP26640 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.29□□□□□ -1.72
VARSP26640 AL441985.1-201ENST00000457727 251 ntBASIC4.29□□□□□ -1.72
VARSP26640 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
VARSP26640 RNA5SP153-201ENST00000516498 76 ntBASIC4.29□□□□□ -1.72
VARSP26640 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.29□□□□□ -1.72
VARSP26640 IFITM8P-201ENST00000522529 394 ntBASIC4.29□□□□□ -1.72
VARSP26640 MIR3939-201ENST00000582614 106 ntBASIC4.29□□□□□ -1.72
VARSP26640 AC020914.4-201ENST00000597690 277 ntBASIC4.29□□□□□ -1.72
VARSP26640 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
VARSP26640 AP001318.4-201ENST00000616637 121 ntBASIC4.29□□□□□ -1.72
VARSP26640 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.29□□□□□ -1.72
VARSP26640 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VARSP26640 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 snoU2_19.1-201ENST00000362361 80 ntBASIC4.28□□□□□ -1.72
VARSP26640 RNU6-766P-201ENST00000362478 107 ntBASIC4.28□□□□□ -1.72
VARSP26640 SNORA27.1-201ENST00000362604 124 ntBASIC4.28□□□□□ -1.72
VARSP26640 Y_RNA.634-201ENST00000364811 113 ntBASIC4.28□□□□□ -1.72
VARSP26640 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.28□□□□□ -1.72
VARSP26640 RBMY2UP-201ENST00000453474 324 ntBASIC4.28□□□□□ -1.72
VARSP26640 RPS26P55-201ENST00000471178 356 ntBASIC4.28□□□□□ -1.72
VARSP26640 SNORA18.4-201ENST00000516440 124 ntBASIC4.28□□□□□ -1.72
VARSP26640 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
VARSP26640 RNU6-63P-201ENST00000516690 95 ntBASIC4.28□□□□□ -1.72
VARSP26640 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.28□□□□□ -1.72
VARSP26640 PRELID2P1-201ENST00000552837 301 ntBASIC4.28□□□□□ -1.72
VARSP26640 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
VARSP26640 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.28□□□□□ -1.72
VARSP26640 AC012531.5-201ENST00000611375 151 ntBASIC4.28□□□□□ -1.72
VARSP26640 MIR6891-201ENST00000618788 93 ntBASIC4.28□□□□□ -1.72
VARSP26640 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VARSP26640 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
VARSP26640 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARSP26640 AC002546.1-201ENST00000588041 2504 ntBASIC4.28□□□□□ -1.72
VARSP26640 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
VARSP26640 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.27□□□□□ -1.73
VARSP26640 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VARSP26640 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.27□□□□□ -1.73
VARSP26640 Y_RNA.52-201ENST00000362760 96 ntBASIC4.27□□□□□ -1.73
VARSP26640 RNU6-1210P-201ENST00000363775 107 ntBASIC4.27□□□□□ -1.73
VARSP26640 SNORA51.4-201ENST00000364993 124 ntBASIC4.27□□□□□ -1.73
VARSP26640 RNU6-49P-201ENST00000384256 107 ntBASIC4.27□□□□□ -1.73
VARSP26640 Y_RNA.558-201ENST00000384685 113 ntBASIC4.27□□□□□ -1.73
VARSP26640 MIR3065-201ENST00000390137 79 ntBASIC4.27□□□□□ -1.73
VARSP26640 AL139095.1-201ENST00000404326 391 ntBASIC4.27□□□□□ -1.73
VARSP26640 AC023141.4-201ENST00000412031 328 ntBASIC4.27□□□□□ -1.73
VARSP26640 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.27□□□□□ -1.73
VARSP26640 AC027419.1-201ENST00000522976 328 ntBASIC4.27□□□□□ -1.73
VARSP26640 IGKV1-22-201ENST00000524313 326 ntBASIC4.27□□□□□ -1.73
VARSP26640 AL110115.1-201ENST00000614396 364 ntBASIC4.27□□□□□ -1.73
VARSP26640 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.27□□□□□ -1.73
VARSP26640 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.27□□□□□ -1.73
VARSP26640 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
VARSP26640 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARSP26640 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VARSP26640 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VARSP26640 AC103988.1-201ENST00000566382 2177 ntBASIC4.26□□□□□ -1.73
VARSP26640 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VARSP26640 RNU1-15P-201ENST00000353977 144 ntBASIC4.26□□□□□ -1.73
VARSP26640 RNU6-655P-201ENST00000362858 107 ntBASIC4.26□□□□□ -1.73
VARSP26640 RNU6-271P-201ENST00000363858 105 ntBASIC4.26□□□□□ -1.73
VARSP26640 RNA5SP125-201ENST00000364843 120 ntBASIC4.26□□□□□ -1.73
VARSP26640 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
VARSP26640 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.26□□□□□ -1.73
VARSP26640 SNRPGP3-201ENST00000469405 227 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms