Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU6-966P-201ENST00000516479 104 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AC025647.1-201ENST00000517879 253 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP1P23763 BX284668.6-201ENST00000606899 438 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AC090115.4-201ENST00000609970 188 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VAMP1P23763 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP1P23763 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
VAMP1P23763 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP1P23763 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VAMP1P23763 Y_RNA.65-201ENST00000362846 100 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 Y_RNA.277-201ENST00000364754 102 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 SNORA70F-201ENST00000384142 135 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 Y_RNA.518-201ENST00000384552 113 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 RNU6-855P-201ENST00000410395 104 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 RNU6-847P-201ENST00000411115 108 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 RNA5SP492-201ENST00000411330 114 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP1P23763 MTCO1P44-201ENST00000441935 243 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP1P23763 RPL21P9-201ENST00000556149 474 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 MIR5684-201ENST00000585074 65 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP1P23763 AL031274.2-201ENST00000599419 203 ntBASIC3.31□□□□□ -1.88
VAMP1P23763 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP1P23763 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP1P23763 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP1P23763 Y_RNA.418-201ENST00000384029 102 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 AL645927.1-201ENST00000396783 406 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 MIR873-201ENST00000401120 77 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.3□□□□□ -1.88
VAMP1P23763 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.3□□□□□ -1.88
VAMP1P23763 SNORD65B-201ENST00000459126 73 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 AC010409.1-201ENST00000487382 476 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.3□□□□□ -1.88
VAMP1P23763 RNU6-388P-201ENST00000517012 105 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 RNU6-389P-201ENST00000517048 105 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 IGKV1-32-201ENST00000519290 311 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.3□□□□□ -1.88
VAMP1P23763 RN7SL690P-201ENST00000582087 240 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 AC005357.1-201ENST00000588399 301 ntBASIC3.3□□□□□ -1.88
VAMP1P23763 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP1P23763 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VAMP1P23763 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VAMP1P23763 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP1P23763 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP1P23763 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP1P23763 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAMP1P23763 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VAMP1P23763 RNU6-379P-201ENST00000363813 104 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 Y_RNA.590-201ENST00000410140 107 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 RN7SKP284-201ENST00000411002 343 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 AL139247.1-201ENST00000422768 325 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.29□□□□□ -1.88
VAMP1P23763 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.29□□□□□ -1.88
VAMP1P23763 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.29□□□□□ -1.88
VAMP1P23763 RN7SL354P-201ENST00000469282 294 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.29□□□□□ -1.88
VAMP1P23763 RPS29P21-201ENST00000496272 170 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 RNA5SP49-201ENST00000516450 115 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 RNU6-856P-201ENST00000516959 98 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.29□□□□□ -1.88
VAMP1P23763 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.29□□□□□ -1.88
VAMP1P23763 AC083809.1-201ENST00000615051 472 ntBASIC3.29□□□□□ -1.88
VAMP1P23763 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAMP1P23763 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VAMP1P23763 RNU6-23P-201ENST00000363283 107 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 MIR29C-201ENST00000385231 88 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 MIR1262-201ENST00000408276 93 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.28□□□□□ -1.88
VAMP1P23763 AL356387.2-201ENST00000422272 243 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.28□□□□□ -1.88
VAMP1P23763 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL121890.1-201ENST00000435457 205 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL772161.1-201ENST00000439130 476 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
VAMP1P23763 RN7SL98P-201ENST00000462271 300 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AC008155.2-201ENST00000464337 397 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 TRBV12-2-201ENST00000489763 344 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AC231760.1-201ENST00000498002 260 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 SNORA27.4-201ENST00000516650 95 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 SUMO2P18-201ENST00000518873 252 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.28□□□□□ -1.88
VAMP1P23763 AL137100.2-201ENST00000555786 315 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AC009127.3-201ENST00000570531 403 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AL162424.1-201ENST00000602325 221 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 AC006435.5-201ENST00000624486 112 ntBASIC3.28□□□□□ -1.88
VAMP1P23763 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
VAMP1P23763 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
VAMP1P23763 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VAMP1P23763 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
VAMP1P23763 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
VAMP1P23763 AL139109.1-201ENST00000455491 297 ntBASIC3.27□□□□□ -1.89
VAMP1P23763 RNA5SP246-201ENST00000458909 119 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms