Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.16□□□□□ -2.22
USF1P22415 RPS26P55-201ENST00000471178 356 ntBASIC1.16□□□□□ -2.22
USF1P22415 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 RNA5SP481-201ENST00000516814 122 ntBASIC1.16□□□□□ -2.22
USF1P22415 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.16□□□□□ -2.22
USF1P22415 HIF1AP1-201ENST00000553642 175 ntBASIC1.16□□□□□ -2.22
USF1P22415 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.16□□□□□ -2.22
USF1P22415 AL391840.1-201ENST00000571144 367 ntBASIC1.16□□□□□ -2.22
USF1P22415 AP005136.1-201ENST00000579765 429 ntBASIC1.16□□□□□ -2.22
USF1P22415 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.16□□□□□ -2.22
USF1P22415 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.16□□□□□ -2.22
USF1P22415 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.16□□□□□ -2.22
USF1P22415 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
USF1P22415 ICE2P2-201ENST00000483823 2787 ntBASIC1.15□□□□□ -2.22
USF1P22415 RNU6-862P-201ENST00000362804 105 ntBASIC1.15□□□□□ -2.23
USF1P22415 Y_RNA.191-201ENST00000363972 113 ntBASIC1.15□□□□□ -2.23
USF1P22415 SNORD1A-201ENST00000364968 72 ntBASIC1.15□□□□□ -2.23
USF1P22415 VN1R108P-201ENST00000431580 830 ntBASIC1.15□□□□□ -2.23
USF1P22415 RPS6P15-201ENST00000431996 751 ntBASIC1.15□□□□□ -2.23
USF1P22415 CETN4P-201ENST00000432407 469 ntBASIC1.15□□□□□ -2.23
USF1P22415 AC245047.4-201ENST00000433189 144 ntBASIC1.15□□□□□ -2.23
USF1P22415 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.15□□□□□ -2.23
USF1P22415 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.15□□□□□ -2.23
USF1P22415 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.15□□□□□ -2.23
USF1P22415 AC099513.1-201ENST00000490423 301 ntBASIC1.15□□□□□ -2.23
USF1P22415 MTCO2P4-201ENST00000517968 247 ntBASIC1.15□□□□□ -2.23
USF1P22415 AC016256.1-201ENST00000547971 354 ntBASIC1.15□□□□□ -2.23
USF1P22415 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.15□□□□□ -2.23
USF1P22415 MTATP6P3-201ENST00000581686 676 ntBASIC1.15□□□□□ -2.23
USF1P22415 AC087683.2-201ENST00000611384 326 ntBASIC1.15□□□□□ -2.23
USF1P22415 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
USF1P22415 AC005609.4-201ENST00000625071 447 ntBASIC1.15□□□□□ -2.23
USF1P22415 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USF1P22415 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
USF1P22415 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.14□□□□□ -2.23
USF1P22415 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
USF1P22415 SNORD33-201ENST00000362761 85 ntBASIC1.14□□□□□ -2.23
USF1P22415 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNU6-1093P-201ENST00000391194 107 ntBASIC1.14□□□□□ -2.23
USF1P22415 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.14□□□□□ -2.23
USF1P22415 MTND2P9-201ENST00000422293 931 ntBASIC1.14□□□□□ -2.23
USF1P22415 AL358934.1-201ENST00000432346 324 ntBASIC1.14□□□□□ -2.23
USF1P22415 USP9YP28-201ENST00000435142 589 ntBASIC1.14□□□□□ -2.23
USF1P22415 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.14□□□□□ -2.23
USF1P22415 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.14□□□□□ -2.23
USF1P22415 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.14□□□□□ -2.23
USF1P22415 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.14□□□□□ -2.23
USF1P22415 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.14□□□□□ -2.23
USF1P22415 snoU13.30-201ENST00000458951 104 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNU7-138P-201ENST00000459479 64 ntBASIC1.14□□□□□ -2.23
USF1P22415 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
USF1P22415 AL163973.1-201ENST00000484753 577 ntBASIC1.14□□□□□ -2.23
USF1P22415 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.14□□□□□ -2.23
USF1P22415 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNU6-856P-201ENST00000516959 98 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNU6-430P-201ENST00000517078 107 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNA5SP437-201ENST00000517249 129 ntBASIC1.14□□□□□ -2.23
USF1P22415 AC040904.1-201ENST00000590850 223 ntBASIC1.14□□□□□ -2.23
USF1P22415 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
USF1P22415 RNU6-562P-201ENST00000362731 107 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU1-96P-201ENST00000364163 162 ntBASIC1.13□□□□□ -2.23
USF1P22415 SNORA63D-201ENST00000364359 132 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU6-877P-201ENST00000383868 107 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU6-203P-201ENST00000384038 104 ntBASIC1.13□□□□□ -2.23
USF1P22415 MIR300-201ENST00000401138 83 ntBASIC1.13□□□□□ -2.23
USF1P22415 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.13□□□□□ -2.23
USF1P22415 MTCO3P29-201ENST00000432119 779 ntBASIC1.13□□□□□ -2.23
USF1P22415 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.13□□□□□ -2.23
USF1P22415 AL121601.2-201ENST00000438019 707 ntBASIC1.13□□□□□ -2.23
USF1P22415 AL031667.1-201ENST00000440222 725 ntBASIC1.13□□□□□ -2.23
USF1P22415 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.13□□□□□ -2.23
USF1P22415 AC069257.2-201ENST00000441819 155 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU7-63P-201ENST00000459054 62 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU7-180P-201ENST00000459240 63 ntBASIC1.13□□□□□ -2.23
USF1P22415 MTND3P7-201ENST00000474435 343 ntBASIC1.13□□□□□ -2.23
USF1P22415 AC067942.3-201ENST00000512025 362 ntBASIC1.13□□□□□ -2.23
USF1P22415 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.13□□□□□ -2.23
USF1P22415 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
USF1P22415 AC090115.3-201ENST00000553218 849 ntBASIC1.13□□□□□ -2.23
USF1P22415 MIR5583-1-201ENST00000580941 59 ntBASIC1.13□□□□□ -2.23
USF1P22415 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.13□□□□□ -2.23
USF1P22415 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
USF1P22415 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.13□□□□□ -2.23
USF1P22415 AC009541.1-201ENST00000438279 2662 ntBASIC1.13□□□□□ -2.23
USF1P22415 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
USF1P22415 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
USF1P22415 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
USF1P22415 Y_RNA.159-201ENST00000363674 87 ntBASIC1.12□□□□□ -2.23
USF1P22415 Y_RNA.169-201ENST00000363745 96 ntBASIC1.12□□□□□ -2.23
USF1P22415 RNU6-996P-201ENST00000365438 107 ntBASIC1.12□□□□□ -2.23
USF1P22415 AC090960.1-201ENST00000421072 306 ntBASIC1.12□□□□□ -2.23
USF1P22415 MTCYBP8-201ENST00000422855 651 ntBASIC1.12□□□□□ -2.23
USF1P22415 AC027119.1-201ENST00000440877 241 ntBASIC1.12□□□□□ -2.23
USF1P22415 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.12□□□□□ -2.23
USF1P22415 RNU6-1037P-201ENST00000459571 107 ntBASIC1.12□□□□□ -2.23
USF1P22415 HMGN2P9-201ENST00000476875 229 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms