Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNU1-48P-201ENST00000516400 162 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC109446.1-201ENST00000566172 220 ntBASIC2.14□□□□□ -2.07
CDH3P22223 MIR4648-201ENST00000580107 72 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC011494.1-201ENST00000596454 237 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC008749.1-201ENST00000597650 306 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC243960.4-201ENST00000600532 288 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
CDH3P22223 AC016727.1-205ENST00000605437 569 ntBASIC2.14□□□□□ -2.07
CDH3P22223 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CDH3P22223 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
CDH3P22223 Y_RNA.70-201ENST00000362886 110 ntBASIC2.13□□□□□ -2.07
CDH3P22223 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH3P22223 SNORA12-201ENST00000391162 147 ntBASIC2.13□□□□□ -2.07
CDH3P22223 SNORA11.4-201ENST00000408823 129 ntBASIC2.13□□□□□ -2.07
CDH3P22223 Y_RNA.594-201ENST00000410373 140 ntBASIC2.13□□□□□ -2.07
CDH3P22223 Y_RNA.597-201ENST00000410463 100 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
CDH3P22223 NCOR1P3-201ENST00000420479 303 ntBASIC2.13□□□□□ -2.07
CDH3P22223 EIF4EP2-201ENST00000422816 654 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AC012306.1-201ENST00000423267 114 ntBASIC2.13□□□□□ -2.07
CDH3P22223 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH3P22223 snoU13.6-201ENST00000458785 104 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.13□□□□□ -2.07
CDH3P22223 AC018868.1-201ENST00000491307 315 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RPS29P21-201ENST00000496272 170 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RNU6-277P-201ENST00000516272 106 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
CDH3P22223 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AL132765.2-201ENST00000610812 351 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AC098657.3-201ENST00000620434 263 ntBASIC2.13□□□□□ -2.07
CDH3P22223 AL359757.2-201ENST00000624309 274 ntBASIC2.13□□□□□ -2.07
CDH3P22223 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH3P22223 AC099654.5-201ENST00000636479 350 ntBASIC2.13□□□□□ -2.07
CDH3P22223 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CDH3P22223 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.13□□□□□ -2.07
CDH3P22223 MTND5P9-201ENST00000503854 1755 ntBASIC2.13□□□□□ -2.07
CDH3P22223 RNU6-378P-201ENST00000384324 107 ntBASIC2.12□□□□□ -2.07
CDH3P22223 MIR1261-201ENST00000408659 82 ntBASIC2.12□□□□□ -2.07
CDH3P22223 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AL358453.1-201ENST00000422522 250 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH3P22223 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH3P22223 Y_RNA.635-201ENST00000459041 101 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AC107032.1-201ENST00000485945 480 ntBASIC2.12□□□□□ -2.07
CDH3P22223 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH3P22223 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AC018630.3-201ENST00000542637 96 ntBASIC2.12□□□□□ -2.07
CDH3P22223 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH3P22223 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.12□□□□□ -2.07
CDH3P22223 CYP4A27P-201ENST00000567218 190 ntBASIC2.12□□□□□ -2.07
CDH3P22223 MIR5696-201ENST00000578474 85 ntBASIC2.12□□□□□ -2.07
CDH3P22223 MIR4287-201ENST00000579398 78 ntBASIC2.12□□□□□ -2.07
CDH3P22223 MIR3923-201ENST00000579521 83 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AL158827.2-201ENST00000602494 330 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AP000654.2-201ENST00000605633 586 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AC005520.5-201ENST00000613926 164 ntBASIC2.12□□□□□ -2.07
CDH3P22223 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH3P22223 AL691447.3-201ENST00000635020 330 ntBASIC2.12□□□□□ -2.07
CDH3P22223 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDH3P22223 AC233981.2-201ENST00000611524 1614 ntBASIC2.12□□□□□ -2.07
CDH3P22223 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.12□□□□□ -2.07
CDH3P22223 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
CDH3P22223 SNORD32B-201ENST00000364460 84 ntBASIC2.11□□□□□ -2.07
CDH3P22223 Y_RNA.263-201ENST00000364659 114 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RNU4-56P-201ENST00000364700 142 ntBASIC2.11□□□□□ -2.07
CDH3P22223 Y_RNA.533-201ENST00000384596 114 ntBASIC2.11□□□□□ -2.07
CDH3P22223 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDH3P22223 RNU6-1009P-201ENST00000390996 107 ntBASIC2.11□□□□□ -2.07
CDH3P22223 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RNU6-1050P-201ENST00000410388 107 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RNU2-48P-201ENST00000410694 191 ntBASIC2.11□□□□□ -2.07
CDH3P22223 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH3P22223 RPL7P42-201ENST00000481005 679 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RPL23AP75-201ENST00000491601 451 ntBASIC2.11□□□□□ -2.07
CDH3P22223 FGF7P4-201ENST00000509595 295 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
CDH3P22223 RNU6-567P-201ENST00000516746 107 ntBASIC2.11□□□□□ -2.07
CDH3P22223 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.11□□□□□ -2.07
CDH3P22223 MIR3126-201ENST00000577443 74 ntBASIC2.11□□□□□ -2.07
CDH3P22223 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH3P22223 AC009229.3-201ENST00000608056 282 ntBASIC2.11□□□□□ -2.07
CDH3P22223 PCGEM1.1-201ENST00000613431 131 ntBASIC2.11□□□□□ -2.07
CDH3P22223 AC025253.1-201ENST00000613623 543 ntBASIC2.11□□□□□ -2.07
CDH3P22223 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
CDH3P22223 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
CDH3P22223 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDH3P22223 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH3P22223 Y_RNA.404-201ENST00000383978 102 ntBASIC2.1□□□□□ -2.07
CDH3P22223 Y_RNA.529-201ENST00000384586 119 ntBASIC2.1□□□□□ -2.07
CDH3P22223 RNA5SP494-201ENST00000410653 129 ntBASIC2.1□□□□□ -2.07
CDH3P22223 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
CDH3P22223 AC243428.1-201ENST00000421099 264 ntBASIC2.1□□□□□ -2.07
CDH3P22223 Z82188.1-201ENST00000436709 154 ntBASIC2.1□□□□□ -2.07
CDH3P22223 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH3P22223 AC087477.1-201ENST00000465747 340 ntBASIC2.1□□□□□ -2.07
CDH3P22223 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms