Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU1-76P-201ENST00000362903 159 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 RNU6-944P-201ENST00000364023 107 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 RNA5SP323-201ENST00000391094 133 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC068533.2-201ENST00000411872 306 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.54□□□□□ -2.66
TOP2AP11388 USP9YP11-201ENST00000427537 717 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AL392003.1-201ENST00000434394 243 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.54□□□□□ -2.66
TOP2AP11388 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.54□□□□□ -2.66
TOP2AP11388 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.54□□□□□ -2.66
TOP2AP11388 RNU6-319P-201ENST00000516025 108 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-1.54□□□□□ -2.66
TOP2AP11388 SUMO2P18-201ENST00000518873 252 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-1.54□□□□□ -2.66
TOP2AP11388 AC121334.2-201ENST00000605387 271 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC106754.2-201ENST00000623006 233 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 U2.21-201ENST00000637295 81 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 AC106754.1-201ENST00000562632 1513 ntBASIC-1.54□□□□□ -2.66
TOP2AP11388 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 MIR653-201ENST00000385279 96 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.55□□□□□ -2.66
TOP2AP11388 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.55□□□□□ -2.66
TOP2AP11388 RPL39P34-201ENST00000477141 156 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 SNORD60.2-201ENST00000516883 86 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.55□□□□□ -2.66
TOP2AP11388 SUMO2P14-201ENST00000604488 293 ntBASIC-1.55□□□□□ -2.66
TOP2AP11388 RNU6-862P-201ENST00000362804 105 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 MIR520G-201ENST00000385064 90 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 MIR520H-201ENST00000385126 88 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 SNORD41-201ENST00000386967 70 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 AC069257.2-201ENST00000441819 155 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 STAG3L5P-204ENST00000443759 179 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.56□□□□□ -2.66
TOP2AP11388 AC023824.3-201ENST00000569003 562 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 RNU6-505P-201ENST00000384427 107 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 SNORA26.3-201ENST00000391119 136 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 ZNF885P-201ENST00000420174 1098 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.56□□□□□ -2.66
TOP2AP11388 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.56□□□□□ -2.66
TOP2AP11388 LINC01399-202ENST00000458450 244 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 AC111193.1-201ENST00000504097 155 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 RNU5B-3P-201ENST00000516601 115 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 AC018630.3-201ENST00000542637 96 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 TMF1P1-201ENST00000576058 373 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 AL136363.2-201ENST00000604173 851 ntBASIC-1.56□□□□□ -2.66
TOP2AP11388 MIR1285-2-201ENST00000408311 88 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 BEND7P1-201ENST00000422058 457 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 AC104073.1-201ENST00000451988 151 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 RNU7-34P-201ENST00000459394 64 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 AC007215.1-201ENST00000464893 276 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
TOP2AP11388 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1.57□□□□□ -2.66
TOP2AP11388 AP002001.1-203ENST00000534002 267 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 AL391903.3-201ENST00000612158 163 ntBASIC-1.57□□□□□ -2.66
TOP2AP11388 MIR655-201ENST00000362159 97 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 RNA5SP205-201ENST00000364653 136 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.58□□□□□ -2.66
TOP2AP11388 MTND1P14-201ENST00000427400 950 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 RNU6-274P-201ENST00000459566 107 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 RNA5SP461-201ENST00000516451 104 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 AC022960.3-201ENST00000619794 441 ntBASIC-1.58□□□□□ -2.66
TOP2AP11388 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 RPL17P19-201ENST00000489069 552 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 RN7SKP164-201ENST00000516138 266 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 RNU6-581P-201ENST00000516214 105 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 BCRP9-201ENST00000605312 388 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 RNU6-91P-201ENST00000607774 107 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 AC245008.1-201ENST00000608123 476 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 AL356596.1-201ENST00000624230 379 ntBASIC-1.59□□□□□ -2.66
TOP2AP11388 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 RNU6-811P-201ENST00000384069 107 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 RNU2-33P-201ENST00000410344 192 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 MLLT10P1-201ENST00000418346 262 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.6□□□□□ -2.67
TOP2AP11388 RNA5SP470-201ENST00000516463 106 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 MRPS36P4-201ENST00000534436 298 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 CR383656.4-201ENST00000546909 122 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 TPRKBP2-201ENST00000565969 475 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 MIR4441-201ENST00000582623 100 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 AC063944.3-201ENST00000609969 533 ntBASIC-1.6□□□□□ -2.67
TOP2AP11388 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 SNORA26-201ENST00000391286 122 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.61□□□□□ -2.67
TOP2AP11388 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 RNU2-53P-201ENST00000516257 147 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AP003168.1-201ENST00000530091 307 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC093012.1-202ENST00000549403 582 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC137800.2-201ENST00000574375 120 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC009318.4-201ENST00000620496 486 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 SNORD32A-201ENST00000364805 84 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC107401.1-201ENST00000503426 685 ntBASIC-1.61□□□□□ -2.67
TOP2AP11388 AC022483.1-201ENST00000514020 567 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms