Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SNORD50.1-201ENST00000362987 71 ntBASIC2.29□□□□□ -2.04
RB1P06400 RNU6-1283P-201ENST00000365314 105 ntBASIC2.29□□□□□ -2.04
RB1P06400 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
RB1P06400 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
RB1P06400 RNA5SP494-201ENST00000410653 129 ntBASIC2.29□□□□□ -2.04
RB1P06400 MTND1P23-201ENST00000416931 372 ntBASIC2.29□□□□□ -2.04
RB1P06400 RPL21P111-201ENST00000418453 477 ntBASIC2.29□□□□□ -2.04
RB1P06400 EIF4EP2-201ENST00000422816 654 ntBASIC2.29□□□□□ -2.04
RB1P06400 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.29□□□□□ -2.04
RB1P06400 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.29□□□□□ -2.04
RB1P06400 AF186996.7-201ENST00000492781 209 ntBASIC2.29□□□□□ -2.04
RB1P06400 MTND5P5-201ENST00000503764 376 ntBASIC2.29□□□□□ -2.04
RB1P06400 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.29□□□□□ -2.04
RB1P06400 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
RB1P06400 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
RB1P06400 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
RB1P06400 RNU1-54P-201ENST00000517181 120 ntBASIC2.29□□□□□ -2.04
RB1P06400 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
RB1P06400 AC109446.1-201ENST00000566172 220 ntBASIC2.29□□□□□ -2.04
RB1P06400 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.29□□□□□ -2.04
RB1P06400 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
RB1P06400 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
RB1P06400 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.29□□□□□ -2.04
RB1P06400 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.29□□□□□ -2.04
RB1P06400 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RB1P06400 RNU6-743P-201ENST00000364151 106 ntBASIC2.28□□□□□ -2.04
RB1P06400 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RB1P06400 RNU6-26P-201ENST00000383985 107 ntBASIC2.28□□□□□ -2.04
RB1P06400 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
RB1P06400 RPS26P42-201ENST00000413485 326 ntBASIC2.28□□□□□ -2.04
RB1P06400 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.28□□□□□ -2.04
RB1P06400 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.28□□□□□ -2.04
RB1P06400 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
RB1P06400 AC079354.2-201ENST00000453523 154 ntBASIC2.28□□□□□ -2.04
RB1P06400 PRELID3BP1-201ENST00000457142 540 ntBASIC2.28□□□□□ -2.04
RB1P06400 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.28□□□□□ -2.04
RB1P06400 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.28□□□□□ -2.04
RB1P06400 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.28□□□□□ -2.04
RB1P06400 AC005741.1-201ENST00000511094 432 ntBASIC2.28□□□□□ -2.04
RB1P06400 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
RB1P06400 Y_RNA.673-201ENST00000516306 88 ntBASIC2.28□□□□□ -2.04
RB1P06400 PRELID2P1-201ENST00000552837 301 ntBASIC2.28□□□□□ -2.04
RB1P06400 MIR6128-201ENST00000615528 109 ntBASIC2.28□□□□□ -2.04
RB1P06400 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.28□□□□□ -2.04
RB1P06400 DUXAP9-208ENST00000622815 614 ntBASIC2.28□□□□□ -2.04
RB1P06400 AC099654.14-201ENST00000638599 341 ntBASIC2.28□□□□□ -2.04
RB1P06400 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RB1P06400 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RB1P06400 RNU6-845P-201ENST00000362578 103 ntBASIC2.27□□□□□ -2.05
RB1P06400 RNU6-1093P-201ENST00000391194 107 ntBASIC2.27□□□□□ -2.05
RB1P06400 MIR548K-201ENST00000408406 116 ntBASIC2.27□□□□□ -2.05
RB1P06400 MIR548F5-201ENST00000408421 86 ntBASIC2.27□□□□□ -2.05
RB1P06400 SRIP3-201ENST00000413200 219 ntBASIC2.27□□□□□ -2.05
RB1P06400 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.27□□□□□ -2.05
RB1P06400 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.27□□□□□ -2.05
RB1P06400 AC107032.1-201ENST00000485945 480 ntBASIC2.27□□□□□ -2.05
RB1P06400 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.27□□□□□ -2.05
RB1P06400 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.27□□□□□ -2.05
RB1P06400 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
RB1P06400 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RB1P06400 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RB1P06400 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
RB1P06400 Y_RNA.166-201ENST00000363730 102 ntBASIC2.26□□□□□ -2.05
RB1P06400 RNU6-234P-201ENST00000365229 104 ntBASIC2.26□□□□□ -2.05
RB1P06400 MIR583-201ENST00000384846 75 ntBASIC2.26□□□□□ -2.05
RB1P06400 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.26□□□□□ -2.05
RB1P06400 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
RB1P06400 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.26□□□□□ -2.05
RB1P06400 PMCHL2-203ENST00000457791 237 ntBASIC2.26□□□□□ -2.05
RB1P06400 AC087477.1-201ENST00000465747 340 ntBASIC2.26□□□□□ -2.05
RB1P06400 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.26□□□□□ -2.05
RB1P06400 RNU7-30P-201ENST00000516835 62 ntBASIC2.26□□□□□ -2.05
RB1P06400 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.26□□□□□ -2.05
RB1P06400 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.26□□□□□ -2.05
RB1P06400 AC005668.1-201ENST00000571142 476 ntBASIC2.26□□□□□ -2.05
RB1P06400 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.26□□□□□ -2.05
RB1P06400 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.26□□□□□ -2.05
RB1P06400 MIR6845-201ENST00000613182 61 ntBASIC2.26□□□□□ -2.05
RB1P06400 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.26□□□□□ -2.05
RB1P06400 SCARNA4-201ENST00000629045 128 ntBASIC2.26□□□□□ -2.05
RB1P06400 Y_RNA.4-201ENST00000362333 112 ntBASIC2.25□□□□□ -2.05
RB1P06400 RNU1-17P-201ENST00000363022 152 ntBASIC2.25□□□□□ -2.05
RB1P06400 Y_RNA.140-201ENST00000363474 103 ntBASIC2.25□□□□□ -2.05
RB1P06400 RNU6-596P-201ENST00000365395 98 ntBASIC2.25□□□□□ -2.05
RB1P06400 AL357139.1-201ENST00000407792 426 ntBASIC2.25□□□□□ -2.05
RB1P06400 AC074085.1-201ENST00000413598 418 ntBASIC2.25□□□□□ -2.05
RB1P06400 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.25□□□□□ -2.05
RB1P06400 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.25□□□□□ -2.05
RB1P06400 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.25□□□□□ -2.05
RB1P06400 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.25□□□□□ -2.05
RB1P06400 SNORA20.3-201ENST00000516880 132 ntBASIC2.25□□□□□ -2.05
RB1P06400 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
RB1P06400 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.25□□□□□ -2.05
RB1P06400 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.25□□□□□ -2.05
RB1P06400 AC090517.1-201ENST00000569307 266 ntBASIC2.25□□□□□ -2.05
RB1P06400 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.25□□□□□ -2.05
RB1P06400 RBM11P1-201ENST00000604951 799 ntBASIC2.25□□□□□ -2.05
RB1P06400 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.25□□□□□ -2.05
RB1P06400 uc_338.5-201ENST00000611839 155 ntBASIC2.25□□□□□ -2.05
RB1P06400 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms