Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR4753-201ENST00000585119 83 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 SNORA51-201ENST00000606420 132 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFAP04085 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFAP04085 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFAP04085 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PDGFAP04085 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFAP04085 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFAP04085 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
PDGFAP04085 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 Y_RNA.24-201ENST00000362508 103 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 RNU6-151P-201ENST00000364158 107 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 snoU2_19.4-201ENST00000364329 80 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 SNORA48.5-201ENST00000391143 135 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 RNU6-131P-201ENST00000391144 107 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 MIR1283-1-201ENST00000408494 87 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 AC009414.1-201ENST00000427200 443 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFAP04085 U3.44-201ENST00000458938 192 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 RNU7-141P-201ENST00000459304 62 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 RNU7-14P-201ENST00000459331 62 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 AC107027.2-201ENST00000512197 115 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 SNORD116-25-201ENST00000516517 92 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFAP04085 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.78□□□□□ -1.8
PDGFAP04085 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFAP04085 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFAP04085 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFAP04085 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PDGFAP04085 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
PDGFAP04085 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PDGFAP04085 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFAP04085 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PDGFAP04085 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 RNU6-144P-201ENST00000383951 107 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFAP04085 AC093663.1-201ENST00000497190 394 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFAP04085 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFAP04085 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFAP04085 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
PDGFAP04085 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFAP04085 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFAP04085 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 RNU6-969P-201ENST00000383900 105 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 RNU6-417P-201ENST00000384712 107 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 RNU6-376P-201ENST00000384731 106 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 MIR616-201ENST00000385293 97 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 MIR873-201ENST00000401120 77 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 RPS4XP2-201ENST00000458402 793 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 AC083906.5-201ENST00000503722 328 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 RNU6-62P-201ENST00000516526 102 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFAP04085 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFAP04085 AL391903.3-201ENST00000612158 163 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 UCA1.1-201ENST00000620952 75 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 AC068700.1-201ENST00000565862 3754 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 AC027290.2-201ENST00000623210 18662 ntBASIC3.76□□□□□ -1.81
PDGFAP04085 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFAP04085 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFAP04085 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFAP04085 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFAP04085 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.75□□□□□ -1.81
PDGFAP04085 GABRG2-229ENST00000641017 3628 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PDGFAP04085 SNORD6-201ENST00000365444 73 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 MIR30B-201ENST00000384850 88 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.75□□□□□ -1.81
PDGFAP04085 HSPE1P21-201ENST00000438283 308 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 RNU7-57P-201ENST00000459540 60 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFAP04085 AC025554.1-201ENST00000505641 188 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.75□□□□□ -1.81
PDGFAP04085 RNU6-1007P-201ENST00000516586 107 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 RNU7-121P-201ENST00000516604 62 ntBASIC3.75□□□□□ -1.81
PDGFAP04085 SNORD59.2-201ENST00000516873 68 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms