Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RPS15AP10-201ENST00000432472 382 ntBASIC1.68□□□□□ -2.14
MMP1P03956 ERLEC1P1-201ENST00000433806 578 ntBASIC1.68□□□□□ -2.14
MMP1P03956 UBE2V1P8-201ENST00000437166 265 ntBASIC1.68□□□□□ -2.14
MMP1P03956 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.68□□□□□ -2.14
MMP1P03956 AC083904.1-201ENST00000487828 231 ntBASIC1.68□□□□□ -2.14
MMP1P03956 PTP4A1P4-201ENST00000512479 322 ntBASIC1.68□□□□□ -2.14
MMP1P03956 RNU6-377P-201ENST00000515965 102 ntBASIC1.68□□□□□ -2.14
MMP1P03956 Y_RNA.675-201ENST00000516389 149 ntBASIC1.68□□□□□ -2.14
MMP1P03956 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
MMP1P03956 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.68□□□□□ -2.14
MMP1P03956 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.68□□□□□ -2.14
MMP1P03956 AC103996.1-201ENST00000555468 102 ntBASIC1.68□□□□□ -2.14
MMP1P03956 AC015720.1-201ENST00000565251 277 ntBASIC1.68□□□□□ -2.14
MMP1P03956 AL078605.1-201ENST00000603529 500 ntBASIC1.68□□□□□ -2.14
MMP1P03956 AC080078.2-201ENST00000603766 501 ntBASIC1.68□□□□□ -2.14
MMP1P03956 CTHRC1P1-201ENST00000605383 469 ntBASIC1.68□□□□□ -2.14
MMP1P03956 MIR3688-2-201ENST00000636963 87 ntBASIC1.68□□□□□ -2.14
MMP1P03956 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.68□□□□□ -2.14
MMP1P03956 AC121333.1-201ENST00000567488 2709 ntBASIC1.68□□□□□ -2.14
MMP1P03956 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
MMP1P03956 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MMP1P03956 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
MMP1P03956 Y_RNA.89-201ENST00000363031 102 ntBASIC1.67□□□□□ -2.14
MMP1P03956 SNORD115-3-201ENST00000363100 82 ntBASIC1.67□□□□□ -2.14
MMP1P03956 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
MMP1P03956 SNORA8-201ENST00000384574 139 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.67□□□□□ -2.14
MMP1P03956 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.67□□□□□ -2.14
MMP1P03956 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.67□□□□□ -2.14
MMP1P03956 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.67□□□□□ -2.14
MMP1P03956 AL031274.1-201ENST00000450334 232 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.67□□□□□ -2.14
MMP1P03956 RNU7-66P-201ENST00000459469 62 ntBASIC1.67□□□□□ -2.14
MMP1P03956 RNU7-138P-201ENST00000459479 64 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC082651.2-201ENST00000496833 166 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.67□□□□□ -2.14
MMP1P03956 RNU6-718P-201ENST00000516166 105 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC069113.1-201ENST00000517763 267 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC109479.2-201ENST00000517842 174 ntBASIC1.67□□□□□ -2.14
MMP1P03956 MTND1P5-201ENST00000517906 940 ntBASIC1.67□□□□□ -2.14
MMP1P03956 AC146944.4-201ENST00000602697 718 ntBASIC1.67□□□□□ -2.14
MMP1P03956 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MMP1P03956 RMST_6.1-201ENST00000611980 203 ntBASIC1.67□□□□□ -2.14
MMP1P03956 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
MMP1P03956 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.67□□□□□ -2.14
MMP1P03956 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.67□□□□□ -2.14
MMP1P03956 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RNU6-527P-201ENST00000363425 104 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RNU6-1222P-201ENST00000384615 107 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RNU6-332P-201ENST00000391193 108 ntBASIC1.66□□□□□ -2.14
MMP1P03956 Y_RNA.599-201ENST00000410489 109 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RNU6-293P-201ENST00000411259 106 ntBASIC1.66□□□□□ -2.14
MMP1P03956 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
MMP1P03956 SNRPEP10-201ENST00000420249 274 ntBASIC1.66□□□□□ -2.14
MMP1P03956 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.66□□□□□ -2.14
MMP1P03956 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
MMP1P03956 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP1P03956 CBX3P6-201ENST00000430257 527 ntBASIC1.66□□□□□ -2.14
MMP1P03956 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
MMP1P03956 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
MMP1P03956 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP1P03956 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP1P03956 AC079140.5-201ENST00000507882 310 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RPL39P5-202ENST00000512505 151 ntBASIC1.66□□□□□ -2.14
MMP1P03956 SNORA19.2-201ENST00000516013 114 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RNU6-965P-201ENST00000516721 96 ntBASIC1.66□□□□□ -2.14
MMP1P03956 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.66□□□□□ -2.14
MMP1P03956 SNORA4-201ENST00000584302 138 ntBASIC1.66□□□□□ -2.14
MMP1P03956 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP1P03956 BNIP3P16-201ENST00000589779 534 ntBASIC1.66□□□□□ -2.14
MMP1P03956 AC064836.2-201ENST00000609491 462 ntBASIC1.66□□□□□ -2.14
MMP1P03956 AC005296.1-201ENST00000616145 209 ntBASIC1.66□□□□□ -2.14
MMP1P03956 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
MMP1P03956 RNU6-1285P-201ENST00000363480 105 ntBASIC1.65□□□□□ -2.15
MMP1P03956 SNORD32A-201ENST00000364805 84 ntBASIC1.65□□□□□ -2.15
MMP1P03956 MIR544A-201ENST00000384855 91 ntBASIC1.65□□□□□ -2.15
MMP1P03956 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
MMP1P03956 EIF4E2P1-201ENST00000393781 255 ntBASIC1.65□□□□□ -2.15
MMP1P03956 Y_RNA.597-201ENST00000410463 100 ntBASIC1.65□□□□□ -2.15
MMP1P03956 RNU6-1148P-201ENST00000410992 104 ntBASIC1.65□□□□□ -2.15
MMP1P03956 ARL5AP1-201ENST00000418991 388 ntBASIC1.65□□□□□ -2.15
MMP1P03956 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
MMP1P03956 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
MMP1P03956 MTCYBP18-201ENST00000501056 747 ntBASIC1.65□□□□□ -2.15
MMP1P03956 RNU1-92P-201ENST00000517017 135 ntBASIC1.65□□□□□ -2.15
MMP1P03956 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.65□□□□□ -2.15
MMP1P03956 RNU6-323P-201ENST00000521915 107 ntBASIC1.65□□□□□ -2.15
MMP1P03956 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.65□□□□□ -2.15
MMP1P03956 AC115990.1-201ENST00000526957 301 ntBASIC1.65□□□□□ -2.15
MMP1P03956 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.65□□□□□ -2.15
MMP1P03956 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.65□□□□□ -2.15
MMP1P03956 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.65□□□□□ -2.15
MMP1P03956 AL357078.3-201ENST00000607528 618 ntBASIC1.65□□□□□ -2.15
MMP1P03956 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.65□□□□□ -2.15
MMP1P03956 MTND5P10-201ENST00000603719 1809 ntBASIC1.65□□□□□ -2.15
MMP1P03956 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
MMP1P03956 U8.1-201ENST00000362843 134 ntBASIC1.64□□□□□ -2.15
MMP1P03956 RNU6-254P-201ENST00000363377 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms