Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DQA1P01909 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.2□□□□□ -2.22
HLA-DQA1P01909 AC121333.1-201ENST00000567488 2709 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 RNU6-254P-201ENST00000363377 107 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 RNU6-1286P-201ENST00000383871 107 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 RNU6-214P-201ENST00000384130 107 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 RNA5SP494-201ENST00000410653 129 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 ARL5AP1-201ENST00000418991 388 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 ERLEC1P1-201ENST00000433806 578 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 USP9YP28-201ENST00000435142 589 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 MTND1P1-201ENST00000445453 368 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 HMGN2P23-201ENST00000456759 269 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AC010531.2-201ENST00000465012 153 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 Y_RNA.675-201ENST00000516389 149 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 CTHRC1P1-201ENST00000605383 469 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 RMST_6.1-201ENST00000611980 203 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 MIR7974-201ENST00000615835 79 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AC068137.3-201ENST00000639191 341 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DQA1P01909 MTND5P9-201ENST00000503854 1755 ntBASIC1.19□□□□□ -2.22
HLA-DQA1P01909 AC092881.1-201ENST00000638218 2733 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AL159152.1-201ENST00000635019 2587 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU1-62P-201ENST00000362599 164 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU6-1252P-201ENST00000363054 104 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU6-112P-201ENST00000363599 104 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU1-42P-201ENST00000364033 160 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU6-418P-201ENST00000384035 107 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU6-1026P-201ENST00000384465 108 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 MIR487A-201ENST00000385009 80 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 MIR9-3-201ENST00000385084 90 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RN7SKP51-201ENST00000410781 304 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 NCOR1P3-201ENST00000420479 303 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC099677.2-201ENST00000436385 175 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 SEPT14P3-201ENST00000439401 183 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AL732372.2-207ENST00000445840 183 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 SEPT14P2-201ENST00000453405 183 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU7-187P-201ENST00000458985 68 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 UBL5P3-201ENST00000475112 231 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 SEPT14P4-201ENST00000513445 186 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 RNU6-970P-201ENST00000516312 107 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 FO082796.1-201ENST00000523795 183 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC026371.1-201ENST00000551867 419 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC245505.1-201ENST00000556398 224 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 HMGB1P33-201ENST00000563485 527 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC100830.2-201ENST00000581636 240 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 FGF7P1-201ENST00000582820 288 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AL162413.1-201ENST00000603198 110 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC004492.1-201ENST00000607036 742 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC009318.2-201ENST00000610917 651 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC068205.3-201ENST00000636385 468 ntBASIC1.18□□□□□ -2.22
HLA-DQA1P01909 AC131280.1-202ENST00000624067 4211 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MIR126-201ENST00000362291 85 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-862P-201ENST00000362804 105 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 SNORD113-7-201ENST00000363762 77 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-1090P-201ENST00000364065 94 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU4-24P-201ENST00000364565 139 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-877P-201ENST00000383868 107 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 Y_RNA.436-201ENST00000384097 102 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RNU6-296P-201ENST00000384608 107 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MIR1261-201ENST00000408659 82 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC004866.1-201ENST00000411748 78 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 VN1R36P-201ENST00000414936 291 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MTCO1P20-201ENST00000425366 358 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC004386.2-201ENST00000441858 148 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 MTATP6P26-201ENST00000445926 662 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC007395.1-201ENST00000451333 677 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AF186996.7-201ENST00000492781 209 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 RPS29P11-201ENST00000496507 171 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 YWHAEP4-201ENST00000505390 198 ntBASIC1.17□□□□□ -2.22
HLA-DQA1P01909 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQA1P01909 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms