Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.26□□□□□ -1.89
CNOT4O95628 AL713866.2-201ENST00000603579 219 ntBASIC3.26□□□□□ -1.89
CNOT4O95628 MIR7851-201ENST00000610611 160 ntBASIC3.26□□□□□ -1.89
CNOT4O95628 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.26□□□□□ -1.89
CNOT4O95628 AC010999.1-201ENST00000611856 324 ntBASIC3.26□□□□□ -1.89
CNOT4O95628 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
CNOT4O95628 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.26□□□□□ -1.89
CNOT4O95628 MIR3529-201ENST00000637713 78 ntBASIC3.26□□□□□ -1.89
CNOT4O95628 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CNOT4O95628 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNOT4O95628 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
CNOT4O95628 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNOT4O95628 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.26□□□□□ -1.89
CNOT4O95628 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNOT4O95628 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 AL109809.4-201ENST00000603520 2185 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 RNU6-1180P-201ENST00000364935 107 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 Y_RNA.435-201ENST00000384095 112 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 RNU6-19P-201ENST00000384718 107 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 MIR147B-201ENST00000390185 80 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 SNORA26.3-201ENST00000391119 136 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 NDUFB4P4-201ENST00000404822 243 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 RPS26P42-201ENST00000413485 326 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 UBBP3-201ENST00000445497 241 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC012308.1-201ENST00000451232 178 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AP000705.1-201ENST00000454567 350 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 TRBV12-2-201ENST00000489763 344 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC092185.1-201ENST00000491371 97 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.25□□□□□ -1.89
CNOT4O95628 RNU6-581P-201ENST00000516214 105 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 RNU6-346P-201ENST00000516288 111 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AP005660.1-201ENST00000522972 293 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.25□□□□□ -1.89
CNOT4O95628 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
CNOT4O95628 AC233702.2-202ENST00000562547 291 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 MIR3144-201ENST00000579460 79 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.25□□□□□ -1.89
CNOT4O95628 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC022441.3-201ENST00000605737 136 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 AC004832.4-201ENST00000608952 331 ntBASIC3.25□□□□□ -1.89
CNOT4O95628 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.25□□□□□ -1.89
CNOT4O95628 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CNOT4O95628 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
CNOT4O95628 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNOT4O95628 Z83843.1-201ENST00000604070 3685 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 BX322639.1-202ENST00000423987 2213 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNOT4O95628 RNU6-704P-201ENST00000364162 103 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 Y_RNA.304-201ENST00000365011 112 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 Y_RNA.308-201ENST00000365043 101 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 SNORD50.2-201ENST00000365465 70 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 RNU6-804P-201ENST00000384286 107 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 Y_RNA.597-201ENST00000410463 100 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 CYCSP4-201ENST00000429682 331 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
CNOT4O95628 RNY3P16-201ENST00000516338 101 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 MTND5P41-201ENST00000517498 206 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.24□□□□□ -1.89
CNOT4O95628 MIR548AI-201ENST00000579940 88 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CNOT4O95628 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNOT4O95628 AC073073.2-201ENST00000609827 2578 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNOT4O95628 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNOT4O95628 ZNF204P-201ENST00000416749 2397 ntBASIC3.24□□□□□ -1.89
CNOT4O95628 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CNOT4O95628 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.24□□□□□ -1.89
CNOT4O95628 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNOT4O95628 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CNOT4O95628 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CNOT4O95628 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CNOT4O95628 Y_RNA.8-201ENST00000362353 102 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 Y_RNA.111-201ENST00000363248 100 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 Y_RNA.217-201ENST00000364214 105 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 SNORA72.2-201ENST00000365028 127 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 RNU6-394P-201ENST00000410735 107 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.23□□□□□ -1.89
CNOT4O95628 AC009237.7-201ENST00000447357 229 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 RPL39P29-201ENST00000447779 157 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 Y_RNA.641-201ENST00000459414 105 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AC107626.1-201ENST00000471084 183 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.23□□□□□ -1.89
CNOT4O95628 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
CNOT4O95628 AC074133.1-201ENST00000515696 183 ntBASIC3.23□□□□□ -1.89
CNOT4O95628 RNA5SP208-201ENST00000516156 78 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms