Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC078795.2-201ENST00000602835 1252 ntBASIC1.1□□□□□ -2.23
BRD4O60885 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
BRD4O60885 Z69720.2-201ENST00000624755 279 ntBASIC1.1□□□□□ -2.23
BRD4O60885 U4.7-201ENST00000638126 106 ntBASIC1.1□□□□□ -2.23
BRD4O60885 AL589743.1-201ENST00000551932 2712 ntBASIC1.1□□□□□ -2.23
BRD4O60885 AL390237.1-201ENST00000404226 1415 ntBASIC1.1□□□□□ -2.23
BRD4O60885 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
BRD4O60885 MIR330-201ENST00000362196 94 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-181P-201ENST00000363225 107 ntBASIC1.09□□□□□ -2.23
BRD4O60885 U3.4-201ENST00000363352 213 ntBASIC1.09□□□□□ -2.23
BRD4O60885 Y_RNA.169-201ENST00000363745 96 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-944P-201ENST00000364023 107 ntBASIC1.09□□□□□ -2.23
BRD4O60885 Y_RNA.201-201ENST00000364052 96 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-743P-201ENST00000364151 106 ntBASIC1.09□□□□□ -2.23
BRD4O60885 Y_RNA.258-201ENST00000364613 105 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-393P-201ENST00000384475 107 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU4-46P-201ENST00000410818 138 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
BRD4O60885 PGBD4P5-201ENST00000445958 426 ntBASIC1.09□□□□□ -2.23
BRD4O60885 MTND1P27-201ENST00000451117 902 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.09□□□□□ -2.23
BRD4O60885 AL162395.1-201ENST00000457882 422 ntBASIC1.09□□□□□ -2.23
BRD4O60885 RNU6-445P-201ENST00000516949 107 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AC109479.2-201ENST00000517842 174 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AC145350.1-201ENST00000567426 208 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AL512605.2-201ENST00000592972 256 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.09□□□□□ -2.23
BRD4O60885 AL109933.3-201ENST00000619095 188 ntBASIC1.09□□□□□ -2.23
BRD4O60885 AC009161.2-201ENST00000624626 138 ntBASIC1.09□□□□□ -2.23
BRD4O60885 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
BRD4O60885 AC245060.5-201ENST00000610778 3293 ntBASIC1.09□□□□□ -2.24
BRD4O60885 Y_RNA.85-201ENST00000363014 111 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNA5SP493-201ENST00000364115 91 ntBASIC1.08□□□□□ -2.24
BRD4O60885 Y_RNA.480-201ENST00000384364 102 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNU6-434P-201ENST00000384376 107 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RN7SKP61-201ENST00000410642 295 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNU6-293P-201ENST00000411259 106 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.08□□□□□ -2.24
BRD4O60885 AC133104.1-201ENST00000429100 218 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RPS15AP10-201ENST00000432472 382 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC027119.1-201ENST00000440877 241 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RPS29P15-201ENST00000458329 171 ntBASIC1.08□□□□□ -2.24
BRD4O60885 MTND3P7-201ENST00000474435 343 ntBASIC1.08□□□□□ -2.24
BRD4O60885 SNORD27.1-201ENST00000516319 72 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC060788.1-201ENST00000521318 469 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC090115.3-201ENST00000553218 849 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC133485.1-201ENST00000567176 124 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC138907.6-201ENST00000568401 126 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC091135.1-201ENST00000585943 307 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC091805.2-201ENST00000603848 235 ntBASIC1.08□□□□□ -2.24
BRD4O60885 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
BRD4O60885 AC097372.5-201ENST00000623665 376 ntBASIC1.08□□□□□ -2.24
BRD4O60885 MTND4P14-201ENST00000435799 1354 ntBASIC1.08□□□□□ -2.24
BRD4O60885 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
BRD4O60885 MIR302D-201ENST00000362275 68 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNU6-105P-201ENST00000363909 104 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNU6-160P-201ENST00000384591 107 ntBASIC1.08□□□□□ -2.24
BRD4O60885 SNORD70.1-201ENST00000391007 85 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.08□□□□□ -2.24
BRD4O60885 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC243964.1-201ENST00000441814 261 ntBASIC1.08□□□□□ -2.24
BRD4O60885 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
BRD4O60885 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.08□□□□□ -2.24
BRD4O60885 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.08□□□□□ -2.24
BRD4O60885 GMFBP1-201ENST00000467831 427 ntBASIC1.08□□□□□ -2.24
BRD4O60885 SNRPGP7-201ENST00000469016 106 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.08□□□□□ -2.24
BRD4O60885 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.08□□□□□ -2.24
BRD4O60885 MTND3P5-201ENST00000512798 333 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC105417.1-201ENST00000514691 285 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNU5F-2P-201ENST00000516066 82 ntBASIC1.08□□□□□ -2.24
BRD4O60885 Y_RNA.717-201ENST00000517106 92 ntBASIC1.08□□□□□ -2.24
BRD4O60885 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.08□□□□□ -2.24
BRD4O60885 AC023050.3-201ENST00000541142 333 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.08□□□□□ -2.24
BRD4O60885 AC136932.1-201ENST00000574771 208 ntBASIC1.08□□□□□ -2.24
BRD4O60885 Z94722.1-201ENST00000604328 474 ntBASIC1.08□□□□□ -2.24
BRD4O60885 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
BRD4O60885 MIR8063-201ENST00000621930 81 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC130454.1-201ENST00000622948 401 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AP000770.2-201ENST00000623694 100 ntBASIC1.08□□□□□ -2.24
BRD4O60885 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
BRD4O60885 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.07□□□□□ -2.24
BRD4O60885 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRD4O60885 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRD4O60885 RNU6-282P-201ENST00000365357 103 ntBASIC1.07□□□□□ -2.24
BRD4O60885 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.07□□□□□ -2.24
BRD4O60885 RNU6-248P-201ENST00000410720 107 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.07□□□□□ -2.24
BRD4O60885 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.07□□□□□ -2.24
BRD4O60885 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.07□□□□□ -2.24
BRD4O60885 AL669831.1-202ENST00000428504 417 ntBASIC1.07□□□□□ -2.24
BRD4O60885 GTF2IP13-201ENST00000438487 386 ntBASIC1.07□□□□□ -2.24
BRD4O60885 PRPS1P1-201ENST00000445305 876 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC022447.4-201ENST00000504053 364 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.07□□□□□ -2.24
BRD4O60885 AC103851.1-201ENST00000506833 274 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC009646.1-201ENST00000510455 318 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms