Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RPL30P4-201ENST00000429309 333 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 RPL39P40-201ENST00000445481 146 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 AC007395.1-201ENST00000451333 677 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 AC073901.1-201ENST00000462471 408 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 AC140059.1-201ENST00000489238 361 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 Y_RNA.668-201ENST00000516233 93 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 Y_RNA.683-201ENST00000516508 93 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 AP003733.2-201ENST00000529409 171 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
KDM1AO60341 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 MIR376A1-201ENST00000616574 68 ntBASIC3.13□□□□□ -1.91
KDM1AO60341 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.13□□□□□ -1.91
KDM1AO60341 RNU1-70P-201ENST00000362618 164 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 RNU1-72P-201ENST00000362976 153 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 SNORD56.5-201ENST00000364281 72 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.12□□□□□ -1.91
KDM1AO60341 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KDM1AO60341 RNU1-109P-201ENST00000383960 147 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.12□□□□□ -1.91
KDM1AO60341 AC136932.1-201ENST00000574771 208 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 AC096577.2-201ENST00000611455 153 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 AC005562.2-201ENST00000618264 111 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 AC090517.3-201ENST00000625170 141 ntBASIC3.12□□□□□ -1.91
KDM1AO60341 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
KDM1AO60341 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KDM1AO60341 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KDM1AO60341 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
KDM1AO60341 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.11□□□□□ -1.91
KDM1AO60341 LINC02555-201ENST00000563933 1951 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 VTRNA1-1-201ENST00000363120 99 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 Y_RNA.179-201ENST00000363844 90 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RNU6-793P-201ENST00000384233 104 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RNU6-472P-201ENST00000384299 107 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 Y_RNA.618-201ENST00000410949 107 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.11□□□□□ -1.91
KDM1AO60341 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
KDM1AO60341 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AC010095.1-201ENST00000443543 144 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
KDM1AO60341 PCNPP5-201ENST00000452246 481 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 SCARNA3-201ENST00000517097 143 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
KDM1AO60341 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.11□□□□□ -1.91
KDM1AO60341 MIR4300-201ENST00000581016 96 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 AC105245.1-201ENST00000581934 244 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 MIR3199-1-201ENST00000582434 88 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 U6.104-201ENST00000637979 90 ntBASIC3.11□□□□□ -1.91
KDM1AO60341 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.11□□□□□ -1.91
KDM1AO60341 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KDM1AO60341 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KDM1AO60341 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 MTND5P35-201ENST00000557537 1720 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KDM1AO60341 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KDM1AO60341 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.1□□□□□ -1.91
KDM1AO60341 RNU1-62P-201ENST00000362599 164 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 Y_RNA.143-201ENST00000363520 106 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 MIR1302-6-201ENST00000408466 90 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 Y_RNA.595-201ENST00000410403 105 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 RPL21P38-201ENST00000418090 167 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.1□□□□□ -1.91
KDM1AO60341 AC027124.2-201ENST00000428249 105 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC091179.3-201ENST00000474761 144 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 RPL26P26-201ENST00000480251 434 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 SNORA40.9-201ENST00000515895 93 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 CYCSP23-201ENST00000519781 313 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
KDM1AO60341 MIR5004-201ENST00000579078 107 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 MIR3671-201ENST00000580455 88 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC010620.2-201ENST00000600135 313 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC006006.1-201ENST00000603082 144 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.1□□□□□ -1.91
KDM1AO60341 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KDM1AO60341 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
KDM1AO60341 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
KDM1AO60341 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KDM1AO60341 Y_RNA.376-201ENST00000365638 108 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 MIR218-1-201ENST00000384999 110 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 SNORD115-46-201ENST00000390982 71 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 SNORA12-201ENST00000391162 147 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 U6atac.2-201ENST00000408644 118 ntBASIC3.09□□□□□ -1.91
KDM1AO60341 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.09□□□□□ -1.91
KDM1AO60341 AC005002.2-201ENST00000438228 269 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms