Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRGAP3O43295 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SRGAP3O43295 MIR410-201ENST00000362222 80 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 Y_RNA.331-201ENST00000365267 102 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 Y_RNA.446-201ENST00000384178 104 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 MIR329-1-201ENST00000385028 80 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 MIR888-201ENST00000401186 77 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 RN7SKP51-201ENST00000410781 304 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 AL390729.2-201ENST00000416137 156 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 AC138623.1-201ENST00000418060 216 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
SRGAP3O43295 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
SRGAP3O43295 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.59□□□□□ -1.83
SRGAP3O43295 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.59□□□□□ -1.83
SRGAP3O43295 Y_RNA.638-201ENST00000459374 113 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 Y_RNA.662-201ENST00000516028 97 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 RNU6-581P-201ENST00000516214 105 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 CR383656.8-201ENST00000549046 145 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 RPL21P9-201ENST00000556149 474 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 MIR5571-201ENST00000577998 113 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 AC005176.2-201ENST00000596933 147 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 AL359198.2-201ENST00000611836 194 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 AC132825.6-201ENST00000638861 357 ntBASIC3.59□□□□□ -1.83
SRGAP3O43295 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.59□□□□□ -1.84
SRGAP3O43295 AL672296.1-201ENST00000427780 2158 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AP003122.5-201ENST00000527668 3766 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RNU6-1141P-201ENST00000364520 107 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RNU6-923P-201ENST00000364753 107 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RNA5SP189-201ENST00000364920 115 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 DYNLT3P1-201ENST00000378574 347 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 SNORA18.3-201ENST00000384122 132 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RNU6-1289P-201ENST00000384431 106 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 SNORA46.1-201ENST00000391069 153 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.58□□□□□ -1.84
SRGAP3O43295 RPL19P1-201ENST00000411635 428 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AL606753.1-201ENST00000427435 87 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 MTCO1P5-201ENST00000433573 344 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AL135938.1-201ENST00000443141 297 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RPL26P9-201ENST00000457466 433 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RPS29P20-201ENST00000489592 171 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RPS27AP10-201ENST00000496103 208 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RNU6-1198P-201ENST00000516904 67 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.58□□□□□ -1.84
SRGAP3O43295 EIF4BP1-201ENST00000554881 351 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AC011471.1-201ENST00000585766 187 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AL078605.1-201ENST00000603529 500 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 AL033523.1-201ENST00000605153 153 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SRGAP3O43295 AC096644.4-201ENST00000563417 2912 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.58□□□□□ -1.84
SRGAP3O43295 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.58□□□□□ -1.84
SRGAP3O43295 AC022336.2-201ENST00000568966 2538 ntBASIC3.58□□□□□ -1.84
SRGAP3O43295 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
SRGAP3O43295 RNU6-525P-201ENST00000363685 104 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 RNU6-873P-201ENST00000363833 107 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 Y_RNA.230-201ENST00000364348 109 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 Y_RNA.383-201ENST00000383855 97 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 RNU6-1145P-201ENST00000384246 107 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 NDUFB4P4-201ENST00000404822 243 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 NDUFS5P4-201ENST00000412983 318 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 AC244505.4-201ENST00000434905 287 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 SSXP5-201ENST00000443473 287 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 AC010095.1-201ENST00000443543 144 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 TMSB4XP3-201ENST00000445144 114 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 ADAM3A-203ENST00000461344 2157 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 RNA5SP468-201ENST00000516782 93 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 RNU6-928P-201ENST00000516876 104 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 SNORA31.23-201ENST00000517219 133 ntBASIC3.57□□□□□ -1.84
SRGAP3O43295 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.57□□□□□ -1.84
SRGAP3O43295 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SRGAP3O43295 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SRGAP3O43295 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.57□□□□□ -1.84
SRGAP3O43295 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.82-201ENST00000363000 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.92-201ENST00000363043 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 RNU6-137P-201ENST00000363680 108 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.170-201ENST00000363746 110 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.235-201ENST00000364412 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.306-201ENST00000365015 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 SNORA72.2-201ENST00000365028 127 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.312-201ENST00000365089 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.322-201ENST00000365151 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 RNA5SP240-201ENST00000365355 128 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 RNA5SP167-201ENST00000365461 116 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.595-201ENST00000410403 105 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 RN7SKP61-201ENST00000410642 295 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AL358075.3-201ENST00000426289 226 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.56□□□□□ -1.84
SRGAP3O43295 AC244670.1-201ENST00000436879 112 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 AC107083.1-201ENST00000439643 279 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 Y_RNA.650-201ENST00000459002 102 ntBASIC3.56□□□□□ -1.84
SRGAP3O43295 RPL30P12-201ENST00000474666 353 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms