Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.32□□□□□ -1.88
SHOXO15266 MIR5096-201ENST00000583713 70 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AC034229.5-201ENST00000624258 185 ntBASIC3.32□□□□□ -1.88
SHOXO15266 AC110079.1-202ENST00000635213 138 ntBASIC3.32□□□□□ -1.88
SHOXO15266 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOXO15266 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHOXO15266 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHOXO15266 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHOXO15266 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.31□□□□□ -1.88
SHOXO15266 MIR383-201ENST00000362257 73 ntBASIC3.31□□□□□ -1.88
SHOXO15266 SNORA60-201ENST00000362396 134 ntBASIC3.31□□□□□ -1.88
SHOXO15266 Y_RNA.287-201ENST00000364853 94 ntBASIC3.31□□□□□ -1.88
SHOXO15266 Y_RNA.571-201ENST00000384753 98 ntBASIC3.31□□□□□ -1.88
SHOXO15266 MIR1294-201ENST00000408503 142 ntBASIC3.31□□□□□ -1.88
SHOXO15266 MIR1251-201ENST00000408552 70 ntBASIC3.31□□□□□ -1.88
SHOXO15266 RN7SKP51-201ENST00000410781 304 ntBASIC3.31□□□□□ -1.88
SHOXO15266 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
SHOXO15266 RPL21P129-201ENST00000491732 478 ntBASIC3.31□□□□□ -1.88
SHOXO15266 RNU6-1219P-201ENST00000516143 112 ntBASIC3.31□□□□□ -1.88
SHOXO15266 RNU7-143P-201ENST00000516781 65 ntBASIC3.31□□□□□ -1.88
SHOXO15266 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
SHOXO15266 AC025627.2-201ENST00000576220 160 ntBASIC3.31□□□□□ -1.88
SHOXO15266 MIR4277-201ENST00000578298 84 ntBASIC3.31□□□□□ -1.88
SHOXO15266 MIR3910-1-201ENST00000580936 111 ntBASIC3.31□□□□□ -1.88
SHOXO15266 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.31□□□□□ -1.88
SHOXO15266 AL591424.2-201ENST00000617023 128 ntBASIC3.31□□□□□ -1.88
SHOXO15266 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SHOXO15266 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
SHOXO15266 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.31□□□□□ -1.88
SHOXO15266 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHOXO15266 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHOXO15266 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.3□□□□□ -1.88
SHOXO15266 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
SHOXO15266 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.3□□□□□ -1.88
SHOXO15266 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
SHOXO15266 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 AC091564.4-201ENST00000533934 2194 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNU1-35P-201ENST00000362782 153 ntBASIC3.3□□□□□ -1.88
SHOXO15266 Y_RNA.121-201ENST00000363309 113 ntBASIC3.3□□□□□ -1.88
SHOXO15266 Y_RNA.170-201ENST00000363746 110 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNA5SP366-201ENST00000365454 123 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNU6-187P-201ENST00000384139 106 ntBASIC3.3□□□□□ -1.88
SHOXO15266 SNORA19-201ENST00000384737 128 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNU6-763P-201ENST00000390865 106 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RPS26P8-201ENST00000393490 348 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
SHOXO15266 AC006011.1-201ENST00000442758 349 ntBASIC3.3□□□□□ -1.88
SHOXO15266 TMSB4XP3-201ENST00000445144 114 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNA5SP246-201ENST00000458909 119 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RN7SL271P-201ENST00000487601 295 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RN7SL604P-201ENST00000492589 296 ntBASIC3.3□□□□□ -1.88
SHOXO15266 MRPS36P2-201ENST00000512569 299 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AC099522.1-202ENST00000514718 367 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.3□□□□□ -1.88
SHOXO15266 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.3□□□□□ -1.88
SHOXO15266 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.3□□□□□ -1.88
SHOXO15266 MIR92B-201ENST00000607575 96 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AC108706.1-201ENST00000611053 297 ntBASIC3.3□□□□□ -1.88
SHOXO15266 AC021753.1-201ENST00000635724 168 ntBASIC3.3□□□□□ -1.88
SHOXO15266 MIR6830-201ENST00000636015 70 ntBASIC3.3□□□□□ -1.88
SHOXO15266 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHOXO15266 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
SHOXO15266 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SHOXO15266 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHOXO15266 AC000403.1-201ENST00000613696 3585 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AL157777.2-201ENST00000258070 137 ntBASIC3.29□□□□□ -1.88
SHOXO15266 MIR548B-201ENST00000385247 97 ntBASIC3.29□□□□□ -1.88
SHOXO15266 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
SHOXO15266 SNORA57.1-201ENST00000391227 145 ntBASIC3.29□□□□□ -1.88
SHOXO15266 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOXO15266 RPS20P10-201ENST00000451209 253 ntBASIC3.29□□□□□ -1.88
SHOXO15266 Y_RNA.637-201ENST00000459424 114 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AC006483.1-201ENST00000487308 313 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.29□□□□□ -1.88
SHOXO15266 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
SHOXO15266 MIR3144-201ENST00000579460 79 ntBASIC3.29□□□□□ -1.88
SHOXO15266 MIR5684-201ENST00000585074 65 ntBASIC3.29□□□□□ -1.88
SHOXO15266 MIR4753-201ENST00000585119 83 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AC114781.5-201ENST00000615297 108 ntBASIC3.29□□□□□ -1.88
SHOXO15266 AC011944.2-201ENST00000624440 683 ntBASIC3.29□□□□□ -1.88
SHOXO15266 U6.115-201ENST00000636045 103 ntBASIC3.29□□□□□ -1.88
SHOXO15266 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHOXO15266 AC010329.5-201ENST00000623497 2174 ntBASIC3.29□□□□□ -1.88
SHOXO15266 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHOXO15266 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHOXO15266 AL049781.1-201ENST00000623195 3585 ntBASIC3.28□□□□□ -1.88
SHOXO15266 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.28□□□□□ -1.88
SHOXO15266 PWAR6-201ENST00000552334 4618 ntBASIC3.28□□□□□ -1.88
SHOXO15266 Y_RNA.238-201ENST00000364441 102 ntBASIC3.28□□□□□ -1.88
SHOXO15266 RNU6-312P-201ENST00000364629 107 ntBASIC3.28□□□□□ -1.88
SHOXO15266 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
SHOXO15266 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
SHOXO15266 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms