Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
CLDN5O00501 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN5O00501 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
CLDN5O00501 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
CLDN5O00501 AC092807.2-201ENST00000609367 243 ntBASIC1.56□□□□□ -2.16
CLDN5O00501 AC005520.5-201ENST00000613926 164 ntBASIC1.56□□□□□ -2.16
CLDN5O00501 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.56□□□□□ -2.16
CLDN5O00501 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.56□□□□□ -2.16
CLDN5O00501 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 RNU1-76P-201ENST00000362903 159 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 RNU6-1085P-201ENST00000363576 107 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 RNU6-1329P-201ENST00000365664 107 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
CLDN5O00501 RNU6-259P-201ENST00000383999 107 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 Y_RNA.481-201ENST00000384373 102 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 RPL21P111-201ENST00000418453 477 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 MRPS10P2-201ENST00000431226 381 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 USP9YP28-201ENST00000435142 589 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.55□□□□□ -2.16
CLDN5O00501 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLDN5O00501 AC016925.1-201ENST00000458303 298 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 SNORA44.1-201ENST00000517031 108 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.55□□□□□ -2.16
CLDN5O00501 MIR3122-201ENST00000577243 73 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 SNORA59B-202ENST00000578183 701 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 AC083806.3-201ENST00000614016 455 ntBASIC1.55□□□□□ -2.16
CLDN5O00501 FER-210ENST00000628534 558 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN5O00501 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CLDN5O00501 Y_RNA.51-201ENST00000362725 102 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 Y_RNA.123-201ENST00000363338 102 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 RNU2-66P-201ENST00000410650 161 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN5O00501 MTCO3P46-201ENST00000425787 232 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN5O00501 HMGB1P18-201ENST00000438801 619 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AL359672.1-201ENST00000442302 409 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN5O00501 MTND3P16-201ENST00000452205 344 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN5O00501 RPS29P27-201ENST00000463711 170 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN5O00501 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN5O00501 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN5O00501 AP005136.1-201ENST00000579765 429 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AC023043.2-201ENST00000589678 1026 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AC016925.2-201ENST00000605108 242 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 RPL17P51-201ENST00000605218 238 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 OR5AK4P-201ENST00000635912 903 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
CLDN5O00501 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN5O00501 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 RNU6-545P-201ENST00000362681 104 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 Y_RNA.132-201ENST00000363421 102 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLDN5O00501 SNORA29-201ENST00000384183 140 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 MTCO3P40-201ENST00000392516 676 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 USP9YP14-201ENST00000430663 563 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC007395.1-201ENST00000451333 677 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 RNU6-1208P-201ENST00000459588 107 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC010531.2-201ENST00000465012 153 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC091435.1-201ENST00000505442 584 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC096745.1-201ENST00000509945 370 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 SNORD60.2-201ENST00000516883 86 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 RNU6-835P-201ENST00000516974 104 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 DEFB131C-201ENST00000528817 165 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN5O00501 AL157687.1-201ENST00000554853 619 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN5O00501 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 Z99129.1-201ENST00000612510 255 ntBASIC1.53□□□□□ -2.16
CLDN5O00501 MTND5P9-201ENST00000503854 1755 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
CLDN5O00501 RNU6-112P-201ENST00000363599 104 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 RNU6-877P-201ENST00000383868 107 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 RNU6-214P-201ENST00000384130 107 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 SNORD116-2-201ENST00000384274 95 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 SNORD116-6-201ENST00000384711 96 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLDN5O00501 RNA5SP494-201ENST00000410653 129 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN5O00501 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN5O00501 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 AC114801.2-201ENST00000503825 781 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 AC091885.1-201ENST00000506658 268 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN5O00501 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN5O00501 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN5O00501 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 RNU6-1332P-201ENST00000516666 104 ntBASIC1.52□□□□□ -2.17
CLDN5O00501 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN5O00501 HMGB1P33-201ENST00000563485 527 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms