Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
DDX39AO00148 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX39AO00148 RNU6-414P-201ENST00000363705 104 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 SNORA18.2-201ENST00000383865 132 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AL663109.1-201ENST00000411498 844 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX39AO00148 MTCO1P44-201ENST00000441935 243 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AC098826.2-201ENST00000452011 651 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 RPS29P27-201ENST00000463711 170 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AC083798.1-201ENST00000472671 131 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 Y_RNA.654-201ENST00000497848 106 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AC114801.2-201ENST00000503825 781 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 HMGN1P13-201ENST00000505795 138 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 SNORA19.2-201ENST00000516013 114 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AP005136.1-201ENST00000579765 429 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 RN7SKP299-201ENST00000606679 301 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 AC064836.2-201ENST00000609491 462 ntBASIC1.72□□□□□ -2.13
DDX39AO00148 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX39AO00148 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
DDX39AO00148 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
DDX39AO00148 RNU6-1322P-201ENST00000364309 107 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 RNU6-1042P-201ENST00000384204 107 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.71□□□□□ -2.14
DDX39AO00148 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.71□□□□□ -2.14
DDX39AO00148 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AL357134.1-201ENST00000445848 426 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AMD1P1-201ENST00000457220 922 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 TPT1P7-201ENST00000458300 517 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AC096745.1-201ENST00000509945 370 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.71□□□□□ -2.14
DDX39AO00148 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.71□□□□□ -2.14
DDX39AO00148 AL118558.2-201ENST00000556294 238 ntBASIC1.71□□□□□ -2.14
DDX39AO00148 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.71□□□□□ -2.14
DDX39AO00148 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
DDX39AO00148 RNU6-562P-201ENST00000362731 107 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 RNU4-13P-201ENST00000364019 141 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 Y_RNA.338-201ENST00000365320 114 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 Y_RNA.378-201ENST00000365652 113 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 RNU6-1329P-201ENST00000365664 107 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 RNU6-38P-201ENST00000384085 107 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 DEFB108C-201ENST00000400154 252 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 MIR1267-201ENST00000408723 78 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 MTCO1P21-201ENST00000416634 589 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 EBAG9P1-201ENST00000418955 543 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
DDX39AO00148 UBE2V1P8-201ENST00000437166 265 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.7□□□□□ -2.14
DDX39AO00148 AC104383.1-201ENST00000530297 370 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 SCOCP1-201ENST00000554676 349 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.7□□□□□ -2.14
DDX39AO00148 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
DDX39AO00148 MIR3611-201ENST00000584484 83 ntBASIC1.7□□□□□ -2.14
DDX39AO00148 FER-210ENST00000628534 558 ntTSL 5 BASIC1.7□□□□□ -2.14
DDX39AO00148 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
DDX39AO00148 RNU6-1317P-201ENST00000364582 104 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 RNU6-877P-201ENST00000383868 107 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 SNORA69-201ENST00000383895 132 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 SNORA29-201ENST00000384183 140 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 RNU6-1119P-201ENST00000384349 108 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 Y_RNA.481-201ENST00000384373 102 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 MIR300-201ENST00000401138 83 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 FGF7P8-201ENST00000402994 292 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 ARL5AP1-201ENST00000418991 388 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AL354695.1-201ENST00000427935 228 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 TIMM9P3-201ENST00000428659 274 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AL359672.1-201ENST00000442302 409 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AC091885.1-201ENST00000506658 268 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AC026470.2-201ENST00000561492 181 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 MIR5692C1-201ENST00000585309 91 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AL121757.2-201ENST00000611223 313 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AC005562.2-201ENST00000618264 111 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 AL359697.1-201ENST00000624879 587 ntBASIC1.69□□□□□ -2.14
DDX39AO00148 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
DDX39AO00148 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
DDX39AO00148 RNA5SP494-201ENST00000410653 129 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 RNU2-7P-201ENST00000410794 178 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.68□□□□□ -2.14
DDX39AO00148 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.68□□□□□ -2.14
DDX39AO00148 AC099677.2-201ENST00000436385 175 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
DDX39AO00148 AC023790.1-201ENST00000482174 347 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 RPL36AP21-201ENST00000490372 323 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.68□□□□□ -2.14
DDX39AO00148 Y_RNA.688-201ENST00000516565 95 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 RNU6-856P-201ENST00000516959 98 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 DEFB131C-201ENST00000528817 165 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
DDX39AO00148 MIR4753-201ENST00000585119 83 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms